Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1233 181 8e-41 seq15296 179 3e-40 seq2532 176 4e-39 seq25758 140 3e-28 seq109705 93.3 3e-14 >seq1233 Length=18904 Score = 181 bits (200), Expect = 8e-41 Identities = 314/451 (70%), Gaps = 4/451 (1%) Strand=Plus/Plus Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274 || || ||||||| || || ||| | || ||||||||||||||||| || ||||| Sbjct 13408 GAAGGAGATTTGGAACCAGTATATAGCTTCCAATGGAGACATTTTGGGGCAGAATACAAA 13467 Query 20275 GACATGAACACAAATTATT-TTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTT 20333 || ||||||| | |||||| | |||||||| |||||| |||| || | ||| | Sbjct 13468 GAGATGAACATAGATTATTCCCAGGCAAGGAGTGGATCAACTACAGAAAGCCATTGACAC 13527 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 ||||||||| | ||| | |||| ||| |||||| | || | ||||| |||||||| | Sbjct 13528 AATTAAAACCAGCCCTGATGACA-AAG-ATTATTATGTGTTCTTGGAATCCTAAAGATCT 13585 Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGA 20453 ||| | |||||| | |||||||| || | || |||||||| || || ||| ||| Sbjct 13586 TCCTCTGATGGCTCTACCTCCATGCCACACTCTCTGCCAATTCTATGTATGGAATGGTGA 13645 Query 20454 ATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGA-CTGGGTGTTCCTTTCAATA 20512 | || ||||| | || || | ||| | |||||| || || | || ||||| | Sbjct 13646 GCTTTCTTGTCAGTTATACCAGCAATCTGGAGATATGTGACCTCAGAGTGATGTTCAACA 13705 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTG 20572 |||| |||||| | ||||| || || ||||| | || |||||| | || | |||| Sbjct 13706 TTGCCAGTTATTCCCTGCTCACCTACATGATCACTCACATTACAGTCCTGAAGCCAGGTG 13765 Query 20573 ACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAAT 20632 | || || ||||| | ||||| || ||| | || | |||||||| || || | ||| Sbjct 13766 ATTTTGTTCACACACTGGGAGATGCTCATCTATATTTGAATCATATTGATCCACTGAAAA 13825 Query 20633 TACAGTTAACACGACAACCAAAACAATTCCC 20663 | ||| | || |||||| || ||||| Sbjct 13826 TTCAGATTCAGTGAGAACCAAGACCTTTCCC 13856 >seq15296 Length=69570 Score = 179 bits (198), Expect = 3e-40 Identities = 423/637 (66%), Gaps = 19/637 (3%) Strand=Plus/Minus Query 19984 ACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCTCGATATAACTTGAGAAATGAA 20043 || || ||||| || | || | ||||| ||||| | || | ||| | || ||| Sbjct 64607 ACGGGCACTGGGACTGTGTCCATGTTTGGCTTGCAAGCCCGCTGCAACCTCCGAGGTGAG 64548 Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 ||||| || | || || || | || || ||||| || || | || | | | ||| Sbjct 64547 TTTCCTTTGCTGACAACCAAGCTTGTGTTCTGGAAGGGTGTGCTGGAGGGCCTGATGTGG 64488 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGC 20163 ||| |||| | || |||||| ||| ||| | | |||||| | || || ||| Sbjct 64487 TTTGTTAAGGATTCCACAAATGCTAAAGAGTTCTCTGCCAAAGGACTGAAAATCTGGGAT 64428 Query 20164 GCACATGGATCTAAGCAATTTTTACACA-GCAATGGATTTGACAACC-GTCAAGAGGGGG 20221 || |||||||| | ||||| ||| ||| || || || ||| || | || || | Sbjct 64427 GCTGATGGATCTTGAGACTTTTTGGACAAGCAGCGG--TTCACTACCAGTAAGGAAGGAG 64370 Query 20222 ATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGA 20281 ||||||| || |||| ||| | |||||||||||||| |||||| || |||| Sbjct 64369 ATTTGGGACCAGTGTGTGGCGC-CTGTGGAGACATTTTGGGACTGAATGCAAAGAGATGA 64311 Query 20282 ACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAA 20341 ||||| |||||| ||| |||||||| |||||| |||| || || || | ||| ||| Sbjct 64310 ACACAGATTATTCTGGGCAAGGAGTGGATCAAGTACAGAAAGTCATGGACACAATCGAAA 64251 Query 20342 CGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAA 20401 | ||||| | |||||||| || ||| | || || || || ||||||| | ||| | | Sbjct 64250 CCAACCCTGATGACAGAAGGATCATTATGTGTGCTTGAAATCCTAAAGAACTTCCTCTGA 64191 Query 20402 TGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGT 20461 |||| |||||||||| ||| || ||||| || ||||| ||| ||| | || | Sbjct 64190 TGGCACTGCCTCCATGCCATGCTCTCTGCCAGTTCTACGTATTGAATGGTGAGCTTTCTT 64131 Query 20462 GTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTT 20521 |||| | || |||||| | |||| | ||||| ||||| |||| Sbjct 64130 GTCAGCTATA--------------CTATGGGCTTCAGTGTGTCATTCAACATTGCCAGTT 64085 Query 20522 ATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCC 20581 | | || || || || |||||||| || || |||| | || | ||||| || || | Sbjct 64084 CTTCCCTACTCACCTACATGATTGCTCACGTCACAGGCCTGAAGCCAGGTGATTTTGTAC 64025 Query 20582 ACACCATAGGAGACGCGCATATTTACCTTAATCATAT 20618 |||| | ||||| || || || || | |||||||| Sbjct 64024 ACACTCTGGGAGATGCTCACATGCACTTCAATCATAT 63988 >seq2532 Length=66247 Score = 176 bits (194), Expect = 4e-39 Identities = 381/569 (67%), Gaps = 26/569 (5%) Strand=Plus/Minus Query 20101 TGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGG 20160 ||||||||||| || || |||||| ||| ||||| | |||| ||| || || ||| Sbjct 37069 TGGTTTATTAAGGGTTCCACAAATGCTAAAGAGCTCTCTGCCAAAGAAGTGAAAATCTGG 37010 Query 20161 AGCGCACATGGATCTAAGCAATTTTTACAC-AGCAATGGATTTGACAACC-GTCAAGAGG 20218 || |||||||| | ||||| || |||| || || || ||| | | || | Sbjct 37009 GATGCCAATGGATCTCGAGACTTTTTGGACAAGCA--GGGGTTCACTACCAGGGAGGAAG 36952 Query 20219 GGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACA 20278 | |||||||| || |||||||| || || |||||||||| ||| || ||||| || | Sbjct 36951 GAGATTTGGGACCAGTGTATGGTTTCCAGTGGAGACATTGTGGGGCAGAATACAAAGAGA 36892 Query 20279 TGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTA 20338 |||||||| |||||| ||| |||||| || ||| | || | Sbjct 36891 TGAACACAGATTATTCTGGGCAAGGA------------------GTCATTGAGGCAACCA 36850 Query 20339 AAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTT 20398 |||| ||||| | |||||||| || ||| | || | ||||| |||||||| | ||| Sbjct 36849 AAACCAACCCTGATGACAGAAGGATCATTATGTGTACTTGGAATCCTAAAGATCTTCCTC 36790 Query 20399 TAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGT 20458 | ||||| ||||||||| ||| || | ||| || || || ||| ||| | | Sbjct 36789 TGATGGCACTGCCTCCATACCATGCTCTCTACCAGTTCTATGTATTGAATGGTGAGCTTT 36730 Query 20459 CGTGTCAAATGTATCAACGATCCGCTGATATGGGACT--GGGTGTTCCTTTCAATATTGC 20516 |||||| | || || ||| | || ||||| || ||||| | ||||| ||||| Sbjct 36729 TTTGTCAACTATACCAGTGATGTGGAGACATGGGCCTCCAGGTGT--CATTCAACATTGC 36672 Query 20517 AAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTT 20576 |||||| | ||||| || || |||||||| || | ||| |||| | ||||| || Sbjct 36671 CAGTTATTCCCTGCTCACCTACATGATTGCTCACATCCCAGGCCTAAAGTCAGGTGATTT 36612 Query 20577 AGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACA 20636 || |||| | ||||| || || || ||| | |||||||| | || | ||| | || Sbjct 36611 TGTACACATTCTGGGAGATGCTCACATATACTTGAATCATATTGGGCCACTGAAAATTCA 36552 Query 20637 GTTAACACGACAACCAAAACAATTCCCAA 20665 | | | | |||||| || ||||||| Sbjct 36551 GATTCAGCAAGAACCAAGACCTTTCCCAA 36523 >seq25758 Length=7456 Score = 140 bits (154), Expect = 3e-28 Identities = 259/375 (69%), Gaps = 4/375 (1%) Strand=Plus/Plus Query 20068 GTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCT 20127 || || ||||| || || | || || |||| ||||||||||| || || |||||| || Sbjct 2413 GTGTTCTGGAAGGGTGTACTGGAGGAACTATTGTGGTTTATTAATGGTTCCACAAATGCT 2472 Query 20128 ACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTA 20187 | ||||| | |||| ||| || || || || ||||| || | | ||||| Sbjct 2473 AAAGAGCTCTCTGCCAAAGCAGTGAAAATCGGGGATGCCAATGGACCTCAAGACTTTTTG 2532 Query 20188 CACAGCAATGGATTTGACAACC-GTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCA 20246 | | || || || || ||| | |||| || |||||||| || ||||||| || || Sbjct 2533 GATAAGAAGGGGTTC-ACTACCAGGGAAGAAGGAGATTTGGGACCA-TGTATGGCTTCCA 2590 Query 20247 ATGGAGACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGT 20306 |||||||||||||| || |||||| || || |||||| |||||| | ||||||| Sbjct 2591 GTGGAGACATTTTGGGGCAGAATATAAAGAGATAAACACAGATTATTCCAGGAAAGGAGT 2650 Query 20307 AGATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTAT 20366 |||||| |||| || || || | ||| ||||| ||||| | |||| ||| || || Sbjct 2651 GGATCAACTACAGAAAGTCGTTGACACAATCAAAACCAACCCTGATGACA-AAGGATCAT 2709 Query 20367 TTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCT 20426 | | || | ||||| |||| || || | ||||| |||||||||| || || Sbjct 2710 TATGTGTTCTTGGAATCGTAAAAATCATTCTCTGATGGCACTGCCTCCATGCTATGCTCT 2769 Query 20427 ATGCCAATTTTACGT 20441 ||||| || || || Sbjct 2770 CTGCCAGTTCTATGT 2784 >seq109705 Length=43380 Score = 93.3 bits (102), Expect = 3e-14 Identities = 186/273 (68%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 20015 TGCAATCTCGATATAACTTGAGAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTT 20074 ||||| | | || ||||| ||| |||| ||||| | || | || || || || | Sbjct 30954 TGCAAGCCTGCTACAACTTCAGAGATGAGTTTCCTCTGCCTACAATCAACCGTGTGTTCT 31013 Query 20075 GGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGC 20134 |||| || || | || || | | ||||||||| | || || |||||| ||| |||| Sbjct 31014 GGAAGGGTGTGCTGGAGGAACTGCTGTGGTTTATTGAGGGTTCCACAAATGCTAAAGAGC 31073 Query 20135 TTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCA 20194 | | |||||||| || || ||| || |||||| | | ||||| ||| | Sbjct 31074 TGTCTGCCAAAGGAGTGAAAATCTGGGATGCCAATGGATTTCGAGACTTTTTGGACAAGA 31133 Query 20195 ATGGATTTGACAACC-GTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGA 20253 | || || || ||| | | || || |||||| | || |||| ||| ||||| |||||| Sbjct 31134 ACGGGTTC-ACTACCAGAGAGGAAGGAGATTTGTGACCAGTGTTTGGCTTTCAGTGGAGA 31192 Query 20254 CATTTTGGAGCTGAATATGTTGACATGAACACA 20286 |||||||| || ||||| || ||||||||| Sbjct 31193 CATTTTGGGGCAGAATACAAAGAGATGAACACA 31225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397832920710895