Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq34511 352 3e-92 seq92824 331 9e-86 seq24704 105 6e-18 seq20505 100 3e-16 >seq34511 Length=68903 Score = 352 bits (390), Expect = 3e-92 Identities = 626/901 (69%), Gaps = 23/901 (3%) Strand=Plus/Plus Query 13855 CTAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTT 13914 ||| || || |||| || | |||| ||| || || | || || || ||| || | Sbjct 59389 CTAGAAGTCTGCATCCAAGGTAAAAGAATTCTCAGCTGGACTTGACATCACTCCCGTTCT 59448 Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 |||||||| | ||||| || ||||||||||| ||||| |||||| ||| ||||| || Sbjct 59449 CTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGATGAGATATTATC 59508 Query 13975 CATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 14034 ||||||||||||||||||| || ||| | || | |||||||||| || | | Sbjct 59509 CATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCTAGTTCCAACATAAC 59568 Query 14035 TCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 14094 ||| || || | || ||||| || || ||||||| |||||||| || || | || Sbjct 59569 TCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCATTCCAATCAACTT 59628 Query 14095 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 14154 |||||| | | |||||||| || | |||||| ||||| ||| | || | | Sbjct 59629 TACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATCGATGAT--TTCT 59686 Query 14155 CGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATC 14214 || | |||| | ||||| | | | ||||| || |||||||| |||||||| Sbjct 59687 TTTACTT-TTTCTTCTGAAGGCTTGTGTACCATGTGTTTGAACATTAAACAGGCAAAATC 59745 Query 14215 ACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAA 14274 ||| || | ||||||||||||||||||||||| || ||||| |||||||| ||||| || Sbjct 59746 ACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTAATCCAGGCATTAA 59805 Query 14275 TCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAAC 14334 ||| ||| |||| ||| ||||| | || || || || |||| ||| ||||| ||||| Sbjct 59806 GTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGAAGATTCCTTCAAC 59865 Query 14335 TGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCT 14394 || ||||| |||| | || ||| | | ||| | | ||| | |||||| Sbjct 59866 AGCTGCAAAAGCTACAAGACG----CCATATGTTGCCTCTCTGTCCCCAATCCATCGCAA 59921 Query 14395 AGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA-AATGTT 14453 ||||| |||| ||| ||||||| | || | |||||| ||||| || | || | Sbjct 59922 CGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATTGAAGAGAAATTC 59981 Query 14454 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 14513 |||| | | || ||| ||| || || |||||||| | |||||||||||| |||| Sbjct 59982 CCTTTTTTGGGGTCCTT--AATATAAGTGTCAATAAGGAGACTATACATTTCAACATGTA 60039 Query 14514 TGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC--TGACCATTGTACCTC 14571 ||||||||||||| || || || ||| ||| | | |||||| |||| ||||| || Sbjct 60040 TGTTTTCCATAGCAATTTGGAAGCCAGAAACA-GGCGAGCTTCAGCGACC--TGTACTTC 60096 Query 14572 TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC 14631 | | || || ||||||||||||||||||| |||||||| |||||||| || || Sbjct 60097 TTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTGCTGCAAAGAAAGC 60156 Query 14632 CAATATGTTTTTAATAAAGTATTGCTCTTCATTG--CTGAGTTTTTTCCAATCGGCT--A 14687 || | | || ||||||| ||||| | | | ||| ||| ||| | ||| | Sbjct 60157 TAACACATGAGATATGAAGTATT--TCTTCTTAGACTTCAGTGTTTCCCAGT--GCTGAA 60212 Query 14688 AATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACA 14747 ||||||||| ||||| || || ||| |||||| || || ||||| ||||||| Sbjct 60213 TATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTCTTATACA 60272 Query 14748 T 14748 | Sbjct 60273 T 60273 >seq92824 Length=186084 Score = 331 bits (366), Expect = 9e-86 Identities = 416/567 (73%), Gaps = 8/567 (1%) Strand=Plus/Plus Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245 || ||||| || |||||||| ||||||||||| || | ||||||||||||||||||||| Sbjct 146038 AGGTGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGT 146097 Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCG 14305 || || ||||| ||||| || ||||| || |||||||| || | ||| ||||| | || Sbjct 146098 TCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCA 146157 Query 14306 AATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAAC 14365 || || || |||||||| ||||| ||||| || ||||| |||| | ||||| ||| | Sbjct 146158 AAAGAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATAT 146217 Query 14366 GATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCC 14425 | ||||| | ||| | ||||| ||||| |||| ||| ||||||| | || | Sbjct 146218 GTTGCTTCTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGC 146277 Query 14426 ATTGTTTCAATAGCATT--AAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTAT 14483 | |||||||| ||||| | | |||| || |||| | || ||| ||| || || | Sbjct 146278 AGCGTTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCCTT--AATATAAGTGT 146335 Query 14484 CAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAA 14543 ||||||| | |||||||||||||| ||||||||||||||||| || || || ||||| | Sbjct 146336 CAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGA 146395 Query 14544 AACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAA 14603 |||| | |||||| | | ||||| ||| | || | || ||||||||||||| | Sbjct 146396 AACAGCGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTA 146455 Query 14604 CTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCAT 14663 |||| |||||||| |||||||| || || || || || ||||||| ||| ||| Sbjct 146456 CTATGCCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCTCAG 146515 Query 14664 TGCTGAGTTTTTTCCAATCGGCT--AAATCCTTAGAAAGATCTACTTCATCAACTGTCCA 14721 | ||| ||| ||| | ||| | ||||||||| ||||| || || ||| | ||||| Sbjct 146516 GCTTCAGTGTTTCCCAGT--GCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCCA 146573 Query 14722 AAAACTAGCAACAGCTTTTTTATACAT 14748 || || | ||||| |||||||| Sbjct 146574 GAAGGAGGCCTCTGCTTTCTTATACAT 146600 >seq24704 Length=62651 Score = 105 bits (116), Expect = 6e-18 Identities = 81/96 (84%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957 || || || |||||| | |||||||| | ||||| || ||||||||||| ||||| ||| Sbjct 14410 GACATCACTCCCATTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCT 14351 Query 13958 TCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13993 |||| ||| ||||| ||||||||||||||||||||| Sbjct 14350 TCCAATGAGATATTCTCCATAAAATCAAATGGATTT 14315 Score = 104 bits (114), Expect = 2e-17 Identities = 106/136 (78%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||||||||||||||| || ||||| ||||| || ||||| || |||||||| | Sbjct 10249 CCTCATCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCT 10190 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | || | |||| | || || || || ||||||| ||||| ||||| || ||||| | Sbjct 10189 TGAGCC-AGATATGGATGCAAAAGAACCAGAAAAGACGATTCCTTCAACAGCTGCAAA-G 10132 Query 14346 CTATTAATCGTTCTCC 14361 ||| | ||||| || Sbjct 10131 CTACAACACGTTCACC 10116 Score = 91.5 bits (100), Expect = 1e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 14473 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532 ||| || || |||||||| | |||||||||||||| ||||||||||||||||| || || Sbjct 6756 AATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTG 6697 Query 14533 AAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCT 14572 || ||||| ||||| | |||||| | | ||||| ||| Sbjct 6696 GAAGCCATAGAAACAGCGAGCTTCAGTCACCTGTACTTCT 6657 >seq20505 Length=154428 Score = 100 bits (110), Expect = 3e-16 Identities = 221/324 (68%), Gaps = 22/324 (7%) Strand=Plus/Minus Query 14227 CTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttt 14286 ||||||| |||||| |||||| || ||||| | || ||| || | || || || || Sbjct 146605 CTCATCTTTACTAAGAAGTTCATTGGAAAAAGCTAGTCCAAGCTTTAAATCT---TTCTT 146549 Query 14287 tAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 14346 | ||| ||||| || || || | ||||||| |||| ||||| || ||||| | Sbjct 146548 GAGCCAGAATATCAATGCAAAAGAATCAGAAAAGA---TTCCTTCAACAGCTGCAAAGAC 146492 Query 14347 TATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTC-AG 14405 || | | ||| ||| | | || || ||||| | ||| | | ||| || || || Sbjct 146491 TACCACACATTCACCATATGTTGTTTCTTTGTCC-----CCAGT--CCAGCACAGTCCAG 146439 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTT-- 14463 ||| ||||||||| || | |||||| | ||| || | | |||| | ||||| Sbjct 146438 CTTTCTTTTTAATACAAGGTAGAGTTTCAGTGCTATTGAAGAGAAATTCCATTTCTTTTG 146379 Query 14464 AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCAT 14523 ||| || ||| || || |||||||| | ||| ||||||||| ||| ||||||||| Sbjct 146378 AGTCTTT--AATATAAGTGTCAATAAGAAGACTA--CATTTCAGAATGT--GTTTTCCAT 146325 Query 14524 AGCTATCTGAAAACCATAAAAACA 14547 || || || || ||||| ||||| Sbjct 146324 AGTAATTTGGAAGCCATAGAAACA 146301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 480671191513480