Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq92824 140 3e-28 seq272715 95.1 1e-14 seq100634 95.1 1e-14 seq34511 93.3 4e-14 seq4507 89.7 5e-13 seq5191 87.8 2e-12 >seq92824 Length=186084 Score = 140 bits (154), Expect = 3e-28 Identities = 249/358 (70%), Gaps = 8/358 (2%) Strand=Plus/Minus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 || || || || || | ||||||||||| | || ||||| || || ||| | || | Sbjct 146672 GAGGAGCCGCTCCTGAAGGAGAATCCCCGGCGCTTCGTCATCTTCCCCATTCAGTACCAT 146613 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||||||||| ||||||| || || ||||| || || || ||||| | || || || || Sbjct 146612 GACATTTGGCACATGTATAAGAAAGCAGAGGCCTCCTTCTGGACGGCTGAGGAGGTGGAT 146553 Query 57627 CTGTCTAAGGAT-CTGAGCGATTGGGATTCCCTCAAAGAATCTGA-GAGAAAT--TTTAT 57682 || ||||||||| | ||| | ||||| | || | | |||| ||||||| || || Sbjct 146552 CTCTCTAAGGATATTCAGC-ACTGGGAAACACTGA---AGCCTGAGGAGAAATACTTCAT 146497 Query 57683 TAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGA 57742 |||| ||| || || || || ||| ||||| || || || || |||||||| || Sbjct 146496 ATCTCACGAGTTAGCTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAATTTGGTGGA 146437 Query 57743 AAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGC 57802 | || |||||||| || ||||| || || | || || || || || ||| | || Sbjct 146436 GCGGTTCAGCCAAGAAGTACAGGTGACTGAAGCTCGCTGTTTCTATGGCTTCCAAATTGC 146377 Query 57803 CATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGAC 57860 || |||||| | ||||| ||||||||| || || || || || || | |||||| Sbjct 146376 TATGGAAAACATACATTCTGAAATGTATAGTCTCCTTATTGACACTTATATTAAGGAC 146319 >seq272715 Length=527 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || ||||| | || || || || Sbjct 482 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACTCTAGAGGTCGAGCCCAGT 423 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | |||||| | ||| |||||||| ||| | || || |||||| Sbjct 422 GACACCATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATTCCACCTGACCAG 363 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || ||||| ||||||||| |||| || ||| || || ||||| Sbjct 362 CAGCGTTTGATTTTCGCGGGCAAACAGCTGGAGGATGGCCGCACTCTGTCAGACTATAAT 303 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || || || || ||||| ||| | ||| | || || Sbjct 302 ATCCAGAAAGAGTCCACCCTGCACCTGGTGCTTCGTCTGCGAGGTGG 256 >seq100634 Length=30925 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 23047 CACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGT 23106 |||||| ||||| ||||||||||| || || || |||| |||||| || || || || Sbjct 10396 CACCTCATCTTTACTAGTGTACTCTACTATCTCTGTGCATAAATTGCTGCATTTGATGGT 10455 Query 23107 GCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGT 23166 |||| || ||| |||||||| ||||| || || |||||||||||||| || || Sbjct 10456 TCCCAGGTTCTGCTGATTGCTTTTCCGATTACAGCTGTCTTTGTAGAGCATGTAAGGGGT 10515 Query 23167 GCCCGTCTCGACCTGCGACTCGATGATCGC 23196 || ||||| ||| || || ||||| || Sbjct 10516 CCCTGTCTCCGTCTGAGATTCAATGATGGC 10545 >seq34511 Length=68903 Score = 93.3 bits (102), Expect = 4e-14 Identities = 243/361 (67%), Gaps = 15/361 (4%) Strand=Plus/Minus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 ||||||||||| | | |||||| | | | ||||| || || || ||| | || | Sbjct 60345 GATGAACCACTCCTAAAGGAGAATACTAGGTGCTTTGTTATCTTCCCCATTCAGTACCAT 60286 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || |||||| ||||||| || || ||| | || || || ||||| || || || || Sbjct 60285 GATATTTGGCACATGTATAAGAAAGCAAAGGCCTCCTTCTGGACAACTGAGGAGGTGGAT 60226 Query 57627 CTGTCTAAGGAT-CTGAGCGATTGGGATTCCCTCAAAGAATCTGAG-AGAAAT--TTTAT 57682 || ||||||||| | ||| | ||||| | || | | ||| || |||||| || || Sbjct 60225 CTCTCTAAGGATATTCAGC-ACTGGGAAACACTGA---AGTCTAAGAAGAAATACTTCAT 60170 Query 57683 TAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGA 57742 || ||||| || || || || ||| ||||| || ||||| || |||||||| | Sbjct 60169 ATCTCATGTGTTAGCTTTCTTTGCAGCAAGTGATGGCATAGTTAATGAAAATTTGGTGG- 60111 Query 57743 AAGATTTTCA--CAAGAAGTGCAAGTGACGGAGGCGAG-ATGCTTTTACGGATTTCAAGT 57799 || |||| |||||||| || || | || || | || ||| || || ||| | Sbjct 60110 -AGCAGTTCAGCCAAGAAGTACAGGTCGCTGAAGCTCGCCTG--TTTCTGGCTTCCAAAT 60054 Query 57800 GGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA 57859 || || |||||| | ||| ||||||||| || || || || || || | ||||| Sbjct 60053 TGCTATGGAAAACATACATGTTGAAATGTATAGTCTCCTTATTGACACTTATATTAAGGA 59994 Query 57860 C 57860 | Sbjct 59993 C 59993 >seq4507 Length=158405 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||||||||| || |||||| | || || || || Sbjct 141320 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 141261 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| ||| || || ||| | || || |||||| Sbjct 141260 GACACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 141201 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || ||||| ||| ||||||| || || || || ||| Sbjct 141200 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 141141 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || ||||| || |||||||||||||| || | || ||||| || Sbjct 141140 ATCCAGAAAGAGTCCACTCTTCATCTGGTCCTACGTCTTAGGGGGGG 141094 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||||||||| || |||||| | || || || || Sbjct 141776 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 141717 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| ||| || || ||| | || || |||||| Sbjct 141716 GACACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 141657 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || ||||| ||| ||||||| || || || || ||| Sbjct 141656 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 141597 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| || |||||||||||||| || | || || || |||| Sbjct 141596 ATCCAGAAAGAGTCCACTCTTCATCTGGTCCTGCGTCTTAGAGGTGGTA 141548 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||||||||| || |||||| | || || || || Sbjct 141548 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 141489 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| ||| || || ||| | || || |||||| Sbjct 141488 GACACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 141429 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || ||||| ||| ||||||| || || || || ||| Sbjct 141428 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 141369 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| || || ||||||||||| || | || || || |||| Sbjct 141368 ATCCAGAAAGAGTCCACCCTTCATCTGGTCCTGCGTCTTAGAGGTGGTA 141320 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||||||||| || |||||| | || || || || Sbjct 142004 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 141945 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| ||| || || ||| | || || |||||| Sbjct 141944 GACACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 141885 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || ||||| ||| ||||||| || || || || ||| Sbjct 141884 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 141825 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| || || ||||||||||| || | || || || |||| Sbjct 141824 ATCCAGAAAGAGTCCACCCTTCATCTGGTCCTGCGTCTTAGAGGTGGTA 141776 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||||||||| || |||||| | || || || || Sbjct 142232 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 142173 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| ||| || || ||| | || || |||||| Sbjct 142172 GACACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 142113 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || ||||| ||| ||||||| || || || || ||| Sbjct 142112 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAAC 142053 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| || || ||||||||||| || | || || || |||| Sbjct 142052 ATCCAGAAAGAGTCCACCCTTCATCTGGTCCTGCGTCTTAGAGGTGGTA 142004 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||||||||| || |||||| | || || || || Sbjct 142460 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 142401 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || | ||| ||| || || ||| | || || |||||| Sbjct 142400 GACACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAG 142341 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || || ||||| ||| ||||||| || || || || ||| Sbjct 142340 CAGAGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCTTGTCTGACTACAAC 142281 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || ||||| || || ||||||||||| || | || || || |||| Sbjct 142280 ATCCAGAAAGAGTCCACCCTTCATCTGGTCCTGCGTCTTAGAGGTGGTA 142232 >seq5191 Length=73165 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/234 (69%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||||||| ||| ||||| |||||| | || || ||| ||| Sbjct 37575 ATGCAGATATTTGTGAAGACTCTGATAGGGAAAACCATCACCCTTGATGTGGAATTGTCT 37634 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | ||| || |||| | || ||| || ||||| | || || || || Sbjct 37635 GATACAATTGAATCGATCAAGGCCAAGATTCAGGATAAAGAAGGTATTCCTCCTGATCAA 37694 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || | | || || || ||||||||| | ||||| ||| ||| || |||||||| Sbjct 37695 CAAAGATTGATGTTTGCAGGCAAACAGCTAGAAGAAGG-ATGTACTTTGGCTGATTATAA 37753 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT-AGAA 31424 ||||||||| || | || |||||||| | || ||||| | || ||| |||| Sbjct 37754 CATTCAAAAGGAGACCACCCTTCATCTTGCCCTGAGACTTCGTGGTGGTGAGAA 37807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444218972091120