Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_003266.2 Length=35994 Score E Sequences producing significant alignments: (Bits) Value seq229759 342 1e-89 >seq229759 Length=864 Score = 342 bits (378), Expect = 1e-89 Identities = 478/665 (72%), Gaps = 13/665 (2%) Strand=Plus/Plus Query 11218 ACGGCGTACGAGCAGACCGTGAAGGAGGAGAGCAACTTCCAAAAATCCTTCAACAACCAC 11277 || |||||||| || || ||||| | ||| ||||| | | || || | ||||||| Sbjct 156 ACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCTCTTT-ACCAACCAC 214 Query 11278 GTGCGCACCCTGATCGCGCGCGAGGAGGTGACCCTGGGCCTGATGCACCTGTGGGACCTG 11337 || | || || | | |||||||| || | | | |||||||| ||||||||| | Sbjct 215 CTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTT 274 Query 11338 CTGGAGGCCATTGTGCAGAACCCCACCAGCAAACCGCTGACGGCG-CAGCTGTTCCTGGT 11396 | | || || ||||| | ||||| ||||| | |||| | |||||||| | Sbjct 275 GTCTTG-CCGCTGGAATCAACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTTAT 333 Query 11397 GGTGCAGCACAGTCGGGACAACGAGACTTTTAGGGAGGCGCTGCTGAATATCACCGAGCC 11456 |||||||||| |||||||||| | || ||||| |||||||| || || ||||| Sbjct 334 AGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCC 393 Query 11457 CGAGGGCCGCTGGCTTCTGGACCTGGTGAATATTCTGCAGAGCATCGTGGTGCAGGAGCG 11516 ||||||||||||||| || || || | || |||||||| ||||| |||||||||||||| Sbjct 394 CGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAGCG 453 Query 11517 CGGGCTGCCGCTGTCCGAGAAGCTGGCGGCCATCAACTTTTCGGTGCTGAGTTTGGGCAA 11576 | || ||| | || ||| ||| ||||| |||| ||| |||| | | ||||||| Sbjct 454 CACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTGGGCAA 513 Query 11577 GTACTACGCTAGGAAGATCTACAAGACCCCGTACGTGCCCATAGACAAGGAGGTGAAGAT 11636 || ||| | | ||| ||| | ||||| ||||| ||| || || | ||||| ||||| Sbjct 514 GTTTTACTCCCGCT-GATATACCATACCCCTTACGTTCCCTTACACCACGAGGTAAAGAT 572 Query 11637 CGACGGGTTTTACATGCGCATGACCCTGAAAGTGCTGACCCTGAGCGACGATCTGGGGGT 11696 ||| ||||| |||||||||||| |||| ||||| ||| ||| |||||| ||| | || Sbjct 573 CGAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTGAGCGT 632 Query 11697 GTACCGCAACGACAGGATGCGCCGCGCGGTAAGCGCCAGCAGGCGGCGCGAGCTGAGCGA 11756 || |||||||| | || | | ||| || |||| ||| ||||||||||||| ||||| Sbjct 633 TTATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCGA 692 Query 11757 TCAGGAGCTGATGCACAGCCTGCAGCGGGCCCTGACCG----GGGCCGGGAC-----CGA 11807 | |||||||||||||||||||| |||||||| | | |||| | ||| || Sbjct 693 CCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGACGATAGAGA 752 Query 11808 GGGGGAGAGCTACTTTGACATGGGCGCGGACCTGCACTGGCAGCCCAGCCGCCGGGTCTT 11867 || ||| |||||||||| |||||| ||||||| |||| || ||||| || | | | Sbjct 753 GGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGCGCCCT 812 Query 11868 GGAAG 11872 | ||| Sbjct 813 GTAAG 817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114679755684792