Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq34511 372 4e-98 seq92824 367 2e-96 seq51583 138 1e-27 seq100634 109 7e-19 seq19303 105 9e-18 seq14936 104 3e-17 seq24704 98.7 1e-15 >seq34511 Length=68903 Score = 372 bits (412), Expect = 4e-98 Identities = 621/890 (70%), Gaps = 12/890 (1%) Strand=Plus/Plus Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911 ||||| |||||| || | || ||||| || || | || || || || || ||||| ||| Sbjct 59432 GACATCACTCCCGTTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCT 59491 Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971 || |||| ||||| ||||| ||||| |||||||| | || ||| || |||| Sbjct 59492 TCCGATGAGATATTATCCATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAA 59551 Query 35972 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 36031 || | ||| | || | ||| ||||| |||||||| || || ||||| | ||| Sbjct 59552 CCTAGTTCCAACATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAA 59611 Query 36032 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 36091 |||||||| || | || || || | ||| |||| | ||| || ||||| || || Sbjct 59612 TTCATTCCAATCAACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACA 59671 Query 36092 GCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAA 36149 || || || || | ||||| ||||||| || || ||| || ||||| | Sbjct 59672 GCATCG---ATGATTTCTTTTACTTTTTCTTCTGAAGGCTTGTGTACCATG--TGTTTGA 59726 Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209 |||| ||||| || ||||| ||||| | |||||| ||||||||||| | ||| ||||||| Sbjct 59727 ACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAA 59786 Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 36269 | || | ||| ||||||| | | | || || ||||| |||||||| ||||| || |||| Sbjct 59787 AAGTTAATCCAGGCATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAG 59846 Query 36270 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGT 36329 ||| ||| |||||||| || || ||||| || | ||| | | | | || | |||| Sbjct 59847 AAAGGAAGATTCCTTCAACAGCTGCAAAAGCTACAAGACGCCATATGTTGCC-TCTCTGT 59905 Query 36330 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389 | ||||| ||||| || || |||||||| |||||||| | | || | | Sbjct 59906 CCCCAATCCATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGG 59965 Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449 |||| |||||| | || || || || |||| ||| || ||||| | ||||||| Sbjct 59966 CATTGAAGAGA-AATTCCCTTTTTTGGGGTCCTTAATATAAGTGTCAATAAGGAGACTAT 60024 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACA-TCTAGCCTCG 36508 ||||||| ||| |||||||| || || ||||| || || ||||||| | ||| || Sbjct 60025 ACATTTCAACATGTATGTTTTCCATAGCAATTTGGAAGCC--AGAAACAGGCGAGCTTCA 60082 Query 36509 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 36568 | | |||||||||| | || | || | ||||||||||| ||||| || ||||| Sbjct 60083 GCGACCTGTACTTCTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTT 60142 Query 36569 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTC 36628 |||||||| || || || ||||| ||| || ||||| | || | | ||| | | | Sbjct 60143 GCTGCAAAGAAAGCTAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCC 60202 Query 36629 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 36688 || | | ||||| ||||| | |||||| || || |||||| || || |||| ||| Sbjct 60203 CAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCT 60262 Query 36689 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 || |||||||| | ||| || ||||| || ||||| || || |||||||| Sbjct 60263 TTCTTATACATGTGCCAAATATCATGGTACTGAATGGGGAAGATAACAAA 60312 >seq92824 Length=186084 Score = 367 bits (406), Expect = 2e-96 Identities = 441/599 (74%), Gaps = 3/599 (1%) Strand=Plus/Plus Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202 ||||| ||||| ||||| || ||||| ||||| | |||||| ||||||||||| | ||| Sbjct 146041 TGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCA 146100 Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262 |||||||| || | || ||||||| || || || || ||||| |||||||| ||||| Sbjct 146101 TTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCAAAA 146160 Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 36322 || ||||||||||| |||||||| || |||||||| || | || | || ||||| Sbjct 146161 GAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATATGTT 146220 Query 36323 GCA---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 36379 || ||||| |||||| ||||| || || |||||||| |||||||||| Sbjct 146221 GCTTCTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGCAGC 146280 Query 36380 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 36439 || || || ||||| |||||| | | | |||| || || |||| ||| || ||||| Sbjct 146281 GTTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCCTTAATATAAGTGTCAATA 146340 Query 36440 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 36499 | |||||||||||||| ||||| |||||||| || || ||||| || || |||||||| Sbjct 146341 AGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAG 146400 Query 36500 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 36559 | ||| || || | |||||||||| | || || || | ||||||||||| ||||| Sbjct 146401 CGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTACTATG 146460 Query 36560 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT 36619 || ||||| |||||||| || || || | || ||| || ||||| || | || | Sbjct 146461 CCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCTCAGGCTTC 146520 Query 36620 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 36679 ||| | | ||| | | ||||| ||||| | |||||| || || | ||||| || || Sbjct 146521 AGTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCCAGAAGGAG 146580 Query 36680 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 |||||||| || |||||||| | ||| |||||||| || ||||| || || || || || Sbjct 146581 GCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTGAATGGGGAAGATGACGAA 146639 >seq51583 Length=75798 Score = 138 bits (152), Expect = 1e-27 Identities = 102/119 (86%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| |||||||||||||| ||||||| ||| || ||||| | ||||| Sbjct 71193 CCTGCTCCAAATTTGCTGAAATCTCTCTTGGATTGTAAAGTGTACAGAGTCAAACCAAGA 71134 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 ||||| |||||||||| ||| |||||||||| ||| |||| ||||||||||||||| || Sbjct 71133 AACACCGCAGTAGTCAACATAAAAGCTTGCAGAACAACATACACATCATAGAAAGTCAC 71075 >seq100634 Length=30925 Score = 109 bits (120), Expect = 7e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| |||| || |||||||| ||||| || ||||| || ||||| | Sbjct 3504 ACCTGAAATTCTCCTGACAGGACCCTCCGAGTATAAATGTTGCTGGTGTAAGGTTCGATG 3563 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 || |||||||| || ||||| |||||||| || ||||| ||||| || || | || ||| Sbjct 3564 GATTCATTATTCCCTAAAATCTGAGCAGTAGAGGCAGTTGGCATTGGGGCAAGCAGCAAA 3623 Query 65301 CTATTTCT 65308 || ||||| Sbjct 3624 CTGTTTCT 3631 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || ||| ||||||||||||||||| || ||||| || || | ||| | ||| |||| || Sbjct 12746 CTCCACACGTTTCATAAAGAGATCCGGGATCCAGAGGGCAAAAAAAAGATCCCTGGCTCG 12805 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 || || || || || || ||||| || || || ||||| | | ||||| | ||||| Sbjct 12806 CTGCTCTTCCTTCCCAGTGTTCTTCTTCAGGTCAAGGAATTCAAAGATATCTAAGTGCCA 12865 Query 66176 CGGTTCCAAGTATATGGC 66193 || |||||||| ||||| Sbjct 12866 TGGCTCCAAGTAGATGGC 12883 >seq19303 Length=70460 Score = 105 bits (116), Expect = 9e-18 Identities = 239/355 (67%), Gaps = 7/355 (2%) Strand=Plus/Minus Query 33901 CCGGTTGATCCAAACCCTTGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCTTTC 33960 || ||||| ||||| |||| |||| | || || ||||| ||| || |||| Sbjct 43172 CCAGTTGAACCAAAACCTTCTGCTCCACGTTCAGTGTCATCTAAGCCTTGGACCTCTTCA 43113 Query 33961 AGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCCCCCGTATTTACA 34020 |||||||||||| | | |||| | | || ||||| || || | || ||| | || || Sbjct 43112 AGTTCTGGATAAAAAACCCGTTCACAAATCAGCTGGGCAATCCGGTCACCCTTTTTCACT 43053 Query 34021 TTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCCCCTATAATCTTCG 34080 | ||||| ||| ||| |||| || | || || | ||||||||| |||||||| Sbjct 43052 TCAAATGTTTCTTTGCCAAAGTTAAAGAGTACAACACCAACATTTCCCCTGTAATCTTCA 42993 Query 34081 TCTATTACACCGCCTCCTATATCAAT---ACCTTTTAGGGACAGACCAGACCTAGGAGCT 34137 ||||| ||||| |||| | ||| || | |||| | || ||||| | ||||| Sbjct 42992 TCTATGACACCAGCTCCCACATCTATGAAATGTTTTGCAGCCAAGCCAGAACGTGGAGCA 42933 Query 34138 ATTCTACCATAGCAGAACTTAGGCATGGACATACTAATATCTGTCTTAATTAATTGTCTT 34197 | ||||||||| || ||| | ||||| ||| |||||||| | | || ||| Sbjct 42932 ACTCTACCATAACACCCAGGAGGGAGAGACATCTGAATGTCTGTCTTCA--CAATGGCTT 42875 Query 34198 TCTCC-TGG-AGGGATAGTATAATAATAAGCGCTATATAAATCATATCCGGCGGC 34250 ||||| ||| || || ||| ||| ||| || || || | || || || ||||| Sbjct 42874 TCTCCATGGCTGGTATTGTACAATCATAGGCACTGTACAGGTCGTAGCCCGCGGC 42820 >seq14936 Length=40044 Score = 104 bits (114), Expect = 3e-17 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 36656 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 36715 |||||||| ||||||| || ||||||| |||| ||||||||| |||||||||||| || Sbjct 39865 ACTTCTTCAGCTGTCCAGAAGGATGCCTGGGCCTGTTTATACATCTTCCAGATGTCAGGA 39924 Query 36716 TATTGAATTGGAAAAATAACAAATC 36740 || |||||||||||||| ||||||| Sbjct 39925 TACTGAATTGGAAAAATGACAAATC 39949 >seq24704 Length=62651 Score = 98.7 bits (108), Expect = 1e-15 Identities = 94/119 (79%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||||||||| | ||| |||||||| || | || ||||||| || || || | Sbjct 10249 CCTCATCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCT 10190 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 36298 | |||| | ||||||| ||||| || |||||||||| |||||||| || || |||||| Sbjct 10189 TGAGCC-AGATATGGATGCAAAAGAACCAGAAAAGACGATTCCTTCAACAGCTGCAAAG 10132 Score = 95.1 bits (104), Expect = 2e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 36419 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 36478 || |||| ||| || ||||| | |||||||||||||| ||||| |||||||| || || Sbjct 6761 TCCTTAATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCA 6702 Query 36479 ATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523 ||||| || || |||||||| | ||| || || | |||||||||| Sbjct 6701 ATTTGGAAGCCATAGAAACAGCGAGCTTCAGTCACCTGTACTTCT 6657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655888027169240