Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq20275 125 6e-24 seq2532 125 6e-24 seq109705 98.7 8e-16 >seq20275 Length=61036 Score = 125 bits (138), Expect = 6e-24 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 ||||||| ||||| ||||| |||| || || || ||||| || ||||||||||| |||| Sbjct 38067 TCAGGCCTGTGACATGAGCAATCATGTAGGTGAGCAGGGCATAACTGGCGATGTTGAACG 38126 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | ||||||||||||||||| | || | |||||||||||| || || ||||| || Sbjct 38127 GCACCCCGAGGCCCATGTCTCCAGAGCGCTGGTACAGCTGACAAGAAAGCTCACCATTCA 38186 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 ||||| ||||| || | | | || || ||||| || |||||| Sbjct 38187 GTACGTAGAACTGGCAGAGAGCATGGCATGGAGGCAGTGCCATC 38230 >seq2532 Length=66247 Score = 125 bits (138), Expect = 6e-24 Identities = 211/303 (70%), Gaps = 8/303 (3%) Strand=Plus/Plus Query 21280 TGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCC---CT 21336 |||| || |||||| |||||||||||||||| || ||||| || |||| ||| || || Sbjct 36898 TGTATTCTGCCCCACAATGTCTCCACTGGAAACCATACACTGGTCCCAAATCTCCTTCCT 36957 Query 21337 CGC-GGCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAA 21395 | | || || ||| |||||| |||||||| | || || || | || ||||| Sbjct 36958 CCCTGGTAGT----GAACCCCTGCTTGTCCAAAAAGTCTCGAGATCCATTGGCATCCCAG 37013 Query 21396 ATTTTTACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGC 21455 ||||| || | | || || || | | | ||||| ||| | |||||||||||| Sbjct 37014 ATTTTCACTTCTTTGGCAGAGAGCTCTTTAGCATTTGTGGAACCCTTAATAAACCACAGC 37073 Query 21456 AACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAACTCGTCC 21515 | | ||||| | ||| |||| ||||| ||||| || | || ||||| ||| || Sbjct 37074 AGTTTCTCCAGCTCACCCTTCCAGAACACAGGCTTGGTTGTCAGCAAAGGAAGCTCCTCT 37133 Query 21516 CTGAGGTTATATCGGGCCTGAAGCCCGAACACGGACCTGGTGCCCACGCCCGTCCTGTCC 21575 | |||||| || ||| | || | | ||||||||| | ||||| |||||| | |||| Sbjct 37134 CAGAGGTTGTAACGGACTTGCAAGTCTAACACGGACATAGTGCCATTGCCCGTGCGGTCC 37193 Query 21576 TCC 21578 ||| Sbjct 37194 TCC 37196 >seq109705 Length=43380 Score = 98.7 bits (108), Expect = 8e-16 Identities = 183/265 (69%), Gaps = 9/265 (3%) Strand=Plus/Minus Query 21280 TGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCC---CT 21336 |||| || |||||||||||||||||||| || || |||| || | || ||| || || Sbjct 31211 TGTATTCTGCCCCAAAATGTCTCCACTGAAAGCCAAACACTGGTCACAAATCTCCTTCCT 31152 Query 21337 CGC-GGCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAA 21395 | | || || ||| || | | |||||||| | || | || | || ||||| Sbjct 31151 CTCTGGTAGT----GAACCCGTTCTTGTCCAAAAAGTCTCGAAATCCATTGGCATCCCAG 31096 Query 21396 ATTTTTACGCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGC 21455 ||||| || || | ||||| || | | | ||||| ||| |||||||||||| Sbjct 31095 ATTTTCACTCCTTTGGCAGACAGCTCTTTAGCATTTGTGGAACCCTCAATAAACCACAGC 31036 Query 21456 AACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAACTCGTCC 21515 | ||||||| || ||| |||| ||||| | ||| | || |||||||||||| || Sbjct 31035 AGTTCCTCCAGCACACCCTTCCAGAACACACGGTTGATTGTAGGCAGAGGAAACTCATCT 30976 Query 21516 CTGAGGTTATATCGGGCCTG-AAGC 21539 |||| ||| || | ||| || |||| Sbjct 30975 CTGAAGTTGTAGCAGGCTTGCAAGC 30951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426328148147280