Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq92824 125 5e-24 seq34511 104 2e-17 >seq92824 Length=186084 Score = 125 bits (138), Expect = 5e-24 Identities = 405/610 (66%), Gaps = 43/610 (7%) Strand=Plus/Minus Query 22332 ACATTTGTGGGCCATGTACAAGAAGGCCGTTGCGTCTTTTTGGACCGTTGAGGAGGTGGA 22391 ||||||| | |||||| ||||| || | || || || ||||| | |||||||||||| Sbjct 146611 ACATTTG--GCACATGTATAAGAAAGCAGAGGCCTCCTTCTGGACGGCTGAGGAGGTGGA 146554 Query 22392 TCTTAGTACTGATGTACGCCATTGGACAGAAAAACTGACCGAGGCTGAGCGCAGGT---T 22448 ||| || ||| | | || ||| |||| ||||| || ||||| | | | Sbjct 146553 TCTCTCTAAGGATATTCAGCACTGG---GAAACACTGA---AGCCTGAGGAGAAATACTT 146500 Query 22449 CATGTCTCACATACTGGCATTCTTTGCAATGGCA---GATGGCATTGTAGGCGACAACCT 22505 ||| |||||| | || ||||||||| ||| |||||||| ||| || || | Sbjct 146499 CATATCTCACGAGTTAGCTTTCTTTGCA---GCAAGTGATGGCATAGTAAATGAAAATTT 146443 Query 22506 TGTGT-GCAATTTCGCAAAAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGGT 22564 ||| || || || || ||| | || | | | ||||| | ||||||||| | Sbjct 146442 GGTGGAGCGGTTCAGCCAA-GAAGT--AC-AGGTGACTGAAGCTCGCTGTTTCTATGGCT 146387 Query 22565 TTCAGGTGGCAATGGAAAATATACATGCTGAAATGTATACTCAGCTGATTATCACATTAG 22624 | || | || |||||||| |||||| |||||||||||| || || ||| ||| ||| Sbjct 146386 TCCAAATTGCTATGGAAAACATACATTCTGAAATGTATAGTCTCCTTATTGACAC-TTA- 146329 Query 22625 TAGCTAAAGAG----AATCAAGCCGCATTGTTTTCA--GCAGCTGAAGATATGCCATGTG 22678 || ||| || || ||| || | |||| || |||| |||| |||| Sbjct 146328 TAT-TAAGGACCCCAAAGAAAGAGAATTTCTCTTCAATGCCATTGAAACGCTGCCTTGTG 146270 Query 22679 TTAAAGCCAAGGCACAGTGGGC--TGCACAATGGCTGAATGCC-ACACATAAGTC---TA 22732 ||||| || || | ||||| ||| || || || ||| | ||| || Sbjct 146269 TTAAAAAGAAAGCTGACTGGGCCTTGC-----GGTGGATTGGGGACAGAGAAGCAACATA 146215 Query 22733 TCGCAACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTG 22792 | | | |||| | | || ||||||||||||||||| || | |||||||| || |||| Sbjct 146214 TGGTGA-ACGTGTTGTAGCTTTTGCGGCTGTTGAAGGAATCTTCTTTTCTGGTTCTTTTG 146156 Query 22793 CGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGT 22852 | ||||||||||||| |||||||| | ||||| ||||| | |||||||| || Sbjct 146155 CATCCATATTCTGGCTCAAGAAACGAGGTTTAATGCCTGGGTTAACTTTTTCCAATGAAC 146096 Query 22853 TGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGG 22912 | ||||| | || || ||| | |||||||| ||||| ||| | |||| | || ||| Sbjct 146095 TTATTAGTAGAGATGAGGGTTTGCACTGTGATTTTGCCTGTTTAATGTTCAAACACCTGG 146036 Query 22913 CAAACAAACC 22922 | |||| || Sbjct 146035 TACACAAGCC 146026 >seq34511 Length=68903 Score = 104 bits (114), Expect = 2e-17 Identities = 299/454 (66%), Gaps = 7/454 (2%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| | || ||||| ||||||||||| || | ||||||| || ||||| ||||| Sbjct 59886 CGTCTTGTAGCTTTTGCAGCTGTTGAAGGAATCTTCCTTTCTGGTTCTTTTGCATCCATA 59827 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||||| |||||| | | ||||| || || | |||||||| || | ||||| Sbjct 59826 TTCTGGCTAAAGAAATGAGACTTAATGCCTGGATTAACTTTTTCCAAGGAACTTATTAGT 59767 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920 | || || ||| | |||||||| ||||| ||| | |||| | || |||| | |||| Sbjct 59766 AGAGATGAGGGTTTGCACTGTGATTTTGCCTGTTTAATGTTCAAACACATGGTACACAAG 59707 Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980 || | | || | | | | ||||||| ||||| ||| | || || || || Sbjct 59706 CCTTCAGAAGAAAAAGTAAAAGAAATCAT---CGATGCTGTTAAAATAGAACAGGAGTTT 59650 Query 22981 TTCCAAGAGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGT-ATGAGACTGTA 23039 || || || || | | |||| |||||| | || | |||| | ||| Sbjct 59649 TTAACTGAAGCTTTACCTGTAAAGTTGATTGGAATGAATTG-CACTTTAATGAAGCAGTA 59591 Query 23040 CATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGT 23099 ||| | ||||| ||||| | | | | || |||| | ||||| || | Sbjct 59590 CATTGAATTTGTAGCAGACAGAGTTATGTTGGAACTAGGTTTTAGCAAGATTCTTAGAGC 59531 Query 23100 TGCCAATCCATTTGATTTCATGGATAACATTAGCAT-TGAAGGTAAAACAAACTTCTTTG 23158 | |||||||||||||| |||||||| | | ||| ||||| ||||| |||||||||| Sbjct 59530 AGAAAATCCATTTGATTTTATGGATAATA-TCTCATCGGAAGGGAAAACCAACTTCTTTG 59472 Query 23159 AACGCCGTGTGAGTGAATATCAGCGAATGGGTGT 23192 | | || | ||||||||| ||| ||| || Sbjct 59471 AGAAGAGAGTAGGAGAATATCAGAGAACGGGAGT 59438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355027890755533