Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8739 109 5e-19 seq100566 107 2e-18 seq62487 105 7e-18 seq4507 96.9 3e-15 seq23718 91.5 1e-13 seq63886 87.8 2e-12 seq77340 82.4 8e-11 >seq8739 Length=53120 Score = 109 bits (120), Expect = 5e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 || |||| || ||||| | || || ||||| || ||||| || || || || | | Sbjct 856 AAGCGCAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGC 797 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 ||||| ||||| || |||||| ||||||| | |||||||| || || ||||||||| Sbjct 796 CCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCCGGGGGGATGCCTTCT 737 Query 139667 TTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGT 139725 ||||| ||| | |||| || | | || | ||||| ||||||| || |||| ||| Sbjct 736 TTGTC-TTGAATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGT 678 Query 139726 CACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | |||||||| ||||| || || || || || ||||| Sbjct 677 GATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 639 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| | || ||||| | || || ||||| || ||||| || || Sbjct 409 CCACCTCTGAGACGAAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAT 350 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| || |||||| |||||| | ||||| || || || Sbjct 349 AGGGTGCGACCATCTTCCAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGG 290 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||||||||| ||| ||| || | | || | ||||| |||||||||| Sbjct 289 ATGCCTTCTTTGTCTTGGATCTTTGCCTTCACGTTCTCAATGGTGTCACTGGGCTCCACT 230 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| ||| | |||||||| ||||| || || ||||| || ||||| Sbjct 229 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAAATCTGCAT 183 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| | || ||||| | || || ||||| || ||||| || || Sbjct 637 CCACCTCTGAGACGAAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAT 578 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| || || ||| ||||||| | ||||| || || || Sbjct 577 AGGGTGCGACCATCTTCCAGCTGCTTCCCGGCAAAGATCAGTCTCTGCTGGTCTGGGGGG 518 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||||||||| ||| ||| || | | || | ||||| ||||||| || Sbjct 517 ATGCCTTCTTTGTCTTGGATCTTTGCCTTCACGTTCTCAATGGTGTCACTGGGCTCTACT 458 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| ||| | |||||||| ||||| || || || || || ||||| Sbjct 457 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 411 >seq100566 Length=62511 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| || || ||||| | || || ||||| || ||||| || || Sbjct 20732 CCACCTCTGAGACGAAAGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAT 20791 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| || |||||| |||||| | |||||||| || || Sbjct 20792 AGGGTGCGACCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGGGGG 20851 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 |||||||||||||| ||| | |||| ||| | | || | ||||| ||||||| || Sbjct 20852 ATGCCTTCTTTGTC-TTGAATCTTTGCTTTCACATTCTCAATGGTGTCACTGGGCTCTAC 20910 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| ||| | |||||||| ||||| || || || || || ||||| Sbjct 20911 TTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 20958 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||| | || ||||||| || || ||||| || ||||| || || | Sbjct 20504 CCACCTCTGAGACGAAGGACCAAGTGAAGAGTTGATTCTTTCTGGATGTTGTAGTCAGAC 20563 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | | ||||| ||||| || |||||| |||||| | ||||| || || || Sbjct 20564 AGGGTACGCCCATCTTCTAGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGG 20623 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 |||||||||||||| ||| ||| || | | || | ||||| ||||||| || Sbjct 20624 ATGCCTTCTTTGTCTTGGATCTTTGCCTTCACATTCTCAATGGTGTCACTGGGCTCTACT 20683 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| ||| | |||||||| ||||| || || || || || ||||| Sbjct 20684 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 20730 >seq62487 Length=10509 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 ||| ||| || ||||| | || || |||||||| ||||| || || || || | Sbjct 5844 AAATGCAGGACCAAGTGCAGGGTGGATTCTTTTTGGATGTTCTAGTCAGACAGGGTATGC 5785 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 ||||| ||||| || |||||| ||||||| | ||||| || || || ||||||||| Sbjct 5784 CCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCT 5725 Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726 ||||| ||| ||| || | | || | ||||| ||||||| || |||| ||| Sbjct 5724 TTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTG 5665 Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | |||||||| ||||| || || || || || ||||| Sbjct 5664 ATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 5627 >seq4507 Length=158405 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||||| || | |||| || |||||||| || ||||| || || | Sbjct 141322 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 141381 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| || || ||| ||||||| | ||||| || || || Sbjct 141382 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 141441 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| ||||| || |||||| || | | || | ||||| ||||||||||| Sbjct 141442 ATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 141501 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | |||||||| |||| || || || || || |||||| Sbjct 141502 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATA 141549 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||||| || | |||| || |||||||| || ||||| || || | Sbjct 141550 CCACCTCTAAGACGCAGGACCAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 141609 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| || || ||| ||||||| | ||||| || || || Sbjct 141610 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 141669 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| ||||| || |||||| || | | || | ||||| ||||||||||| Sbjct 141670 ATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 141729 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | |||||||| |||| || || || || || |||||| Sbjct 141730 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATA 141777 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||||| || | |||| || |||||||| || ||||| || || | Sbjct 141778 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 141837 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| || || ||| ||||||| | ||||| || || || Sbjct 141838 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 141897 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| ||||| || |||||| || | | || | ||||| ||||||||||| Sbjct 141898 ATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 141957 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | |||||||| |||| || || || || || |||||| Sbjct 141958 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATA 142005 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||||| || | |||| || |||||||| || ||||| || || | Sbjct 142006 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 142065 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| || || ||| ||||||| | ||||| || || || Sbjct 142066 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 142125 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| ||||| || |||||| || | | || | ||||| ||||||||||| Sbjct 142126 ATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 142185 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | ||| | |||||||| |||| || || || || || |||||| Sbjct 142186 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATA 142233 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| | ||||| || | |||| || |||||||| || ||||| || || | Sbjct 142234 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 142293 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| ||||| || || ||| ||||||| | ||||| || || || Sbjct 142294 AAGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 142353 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 ||||| ||||| || |||||| || | | || | ||||| ||||||||||| Sbjct 142354 ATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 142413 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | |||||||| |||| || || || || || ||||| Sbjct 142414 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142460 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || |||||||| || ||||| || || || |||| ||||| ||||| Sbjct 141118 TGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCTTCCAGCTGC 141177 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || || ||| ||||||| | ||||| || || || ||||| ||||| || |||||| Sbjct 141178 TTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATTTTG 141237 Query 139682 TGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTC 139741 || | | || | ||||| ||||||||||||| | ||| | |||||||| ||| Sbjct 141238 GCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCTGTC 141297 Query 139742 AACGTTTTTACGAATATTTGCATA 139765 | || || || || || |||||| Sbjct 141298 AGGGTCTTCACAAAGATCTGCATA 141321 >seq23718 Length=96463 Score = 91.5 bits (100), Expect = 1e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || |||||| ||||||| | |||||||| || || |||||||||||| Sbjct 37298 TCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCTTTG 37239 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || ||| ||| || | | | ||||| ||| |||||| |||| ||| | Sbjct 37238 TCTTGGATCTTTGCCTTGACATTCTTAGTGGTGTCACTGGTCTCCACTTCAAAGGTGATG 37179 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||||||| ||||| || || | ||| || ||||| Sbjct 37178 GTCTTGCCAGTCAAAGTCTTCATGAAAATCTGCAT 37144 >seq63886 Length=20840 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 139574 TCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAG 139633 |||||||| ||||| ||||| || || ||| ||||| ||||| || |||||| || Sbjct 20214 TCTTTTTGGATGTTGTAATCAGACAAGGTACTCTCATCTTCTAGCTGCTTTCCAGCAAAG 20155 Query 139634 ATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT 139693 |||| | ||||| || | || |||||||||||||| ||| ||| || | Sbjct 20154 ATCAACCTCTGCTGTTCTGAGGGGATGCCTTCTTTGTCTTGGATCTTTGCCTTGACACTC 20095 Query 139694 TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACG 139753 |||| ||||| |||| ||||| |||| ||| | || | ||| ||||| || || || Sbjct 20094 TCCATGGTGTCACTGGGTTCCACTTCAAGGGTGATGGTTTAGCCAGTCAAGGTCTTCACA 20035 Query 139754 AATATTTGCAT 139764 || || | ||| Sbjct 20034 AAAATCTACAT 20024 >seq77340 Length=225708 Score = 82.4 bits (90), Expect = 8e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 139559 AAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGC 139618 ||||| | || || | ||| || ||||| || || || || | | ||||| | | Sbjct 218781 AAGTGCAGGGTGGATTTTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAAC 218722 Query 139619 TGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATT 139678 || || |||||| ||||||| | |||||||| || || |||||||||||||| ||| Sbjct 218721 TGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCTTTGTCTTGGATC 218662 Query 139679 TTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCG 139738 ||| || | | || | ||||| || |||| | |||| ||| | |||||||| Sbjct 218661 TTTGCCTTGACATTCTCAATGGTGTCACTGAGCTCTGCTTCAAGGGTGATGGTCTTGCCA 218602 Query 139739 GTCAACGTTTTTACGAATATTTGCA 139763 ||||| || || | || || |||| Sbjct 218601 GTCAAGGTCTTCAGAAAGATCTGCA 218577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494341969631200