Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq34511 383 2e-101 seq92824 379 3e-100 seq20505 129 8e-25 seq100634 114 2e-20 seq19303 111 2e-19 seq24704 107 3e-18 seq14936 96.9 5e-15 >seq34511 Length=68903 Score = 383 bits (424), Expect = 2e-101 Identities = 656/946 (69%), Gaps = 17/946 (2%) Strand=Plus/Plus Query 49602 ATTTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACAT 49658 |||| ||| | || ||||| |||| | | |||| ||| || || || ||||| Sbjct 59377 ATTTCAGTTCATCTAGAAGTCTGCATCCAAGGTAAAAGAATTCTCAGCTGGACTTGACAT 59436 Query 49659 AACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAA 49718 |||||| || | || ||||| || || | || || || || || ||||| |||||| | Sbjct 59437 CACTCCCGTTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGA 59496 Query 49719 TGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA 49778 ||| ||||| ||||| |||||||| ||||| | || ||| || |||| || | Sbjct 59497 TGAGATATTATCCATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCTAG 59556 Query 49779 TTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCAT 49838 ||| | || | ||| || || |||||||| || || ||||| | |||||||| Sbjct 59557 TTCCAACATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCAT 59616 Query 49839 TCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATC 49898 ||| || | || || || | ||| |||| | ||| || ||||| || || ||||| Sbjct 59617 TCCAATCAACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATC 59676 Query 49899 TGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAA 49958 || || | | || ||||||| || || | | ||||| ||||| || Sbjct 59677 G---ATGATTTCTTTTACTTTTTCTTCTGAAGGCTTGTGTACCATGTGTTTGAACATTAA 59733 Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || ||||| ||||||| |||||| ||||||||||| ||||| |||||||| || | Sbjct 59734 ACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTAA 59793 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 ||| ||||||| | | | || || ||||| |||||||| ||||| || ||||||| ||| Sbjct 59794 TCCAGGCATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGAA 59853 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATG 50135 ||||||||| || || ||||| || ||||| | | |||| | || ||||| Sbjct 59854 GATTCCTTCAACAGCTGCAAAAGCTACAAGACGC----CATATGTTGCCTCTCTGTCCCC 59909 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| ||||| || || |||||||| |||||||| | | |||| | |||||| Sbjct 59910 AATCCATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATT 59969 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 |||||| | | ||| || || |||| |||||| || || | ||||||||||| Sbjct 59970 GAAGAGAAATTCCCTTTT-TTGGGGTCCTTAATATAAGTGTCAATAAGGAGACTATACAT 60028 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT-CTAGCCTCGGTAA 50314 ||| ||| |||||||| || || || || || || ||||||| | ||| || | | Sbjct 60029 TTCAACATGTATGTTTTCCATAGCAATTTGGAAGCC--AGAAACAGGCGAGCTTCAGCGA 60086 Query 50315 TCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 50374 ||| |||||| | || | || | ||||||||||| ||||| || ||||| |||| Sbjct 60087 CCTGTACTTCTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTGCTG 60146 Query 50375 CAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAAT 50434 |||| || || || ||||| ||| || | ||| | || | | ||| | | ||| | Sbjct 60147 CAAAGAAAGCTAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCCCAGT 60206 Query 50435 CATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 50494 | ||||| ||||| | ||| || || || |||||| || || |||| ||| || | Sbjct 60207 GCTGAATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTCT 60266 Query 50495 TATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 ||||||| | ||| || ||||| || || || ||||| |||||||| Sbjct 60267 TATACATGTGCCAAATATCATGGTACTGAATGGGGAAGATAACAAA 60312 >seq92824 Length=186084 Score = 379 bits (420), Expect = 3e-100 Identities = 444/599 (74%), Gaps = 3/599 (1%) Strand=Plus/Plus Query 49945 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 50004 ||||| ||||| ||||| || ||||| ||||||| |||||| ||||||||||| ||||| Sbjct 146041 TGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCA 146100 Query 50005 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 50064 |||||||| || | || ||||||| || || || || ||||| |||||||| ||||| Sbjct 146101 TTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCAAAA 146160 Query 50065 GACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTG 50124 || |||||||||||||||||||| || || ||||| || |||| | || ||||| | Sbjct 146161 GAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATATGTT 146220 Query 50125 GCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 50181 || ||||| |||||| ||||| || || |||||||| |||||||||| | Sbjct 146221 GCTTCTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGCAGC 146280 Query 50182 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 50241 ||||| |||||||| |||||| | | | |||| || || |||| |||||| || || Sbjct 146281 GTTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCCTTAATATAAGTGTCAATA 146340 Query 50242 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 50301 | |||||||||||||| ||||| |||||||| || || || || || || |||||||| Sbjct 146341 AGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAG 146400 Query 50302 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATT 50361 | ||| || || | ||| |||||| | || || || | ||||||||||| ||||| Sbjct 146401 CGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTACTATG 146460 Query 50362 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTT 50421 || ||||| |||||||| || || || | || ||| || | ||| || | || | Sbjct 146461 CCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCTCAGGCTTC 146520 Query 50422 AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 50481 ||| | | ||| | | ||||| ||||| | ||| || || || | ||||| || || Sbjct 146521 AGTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCCAGAAGGAG 146580 Query 50482 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 |||||||| || |||||||| | ||| |||||||| || || || ||||| || || || Sbjct 146581 GCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTGAATGGGGAAGATGACGAA 146639 >seq20505 Length=154428 Score = 129 bits (142), Expect = 8e-25 Identities = 286/418 (68%), Gaps = 22/418 (5%) Strand=Plus/Minus Query 49980 ACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTT 50039 || ||| ||| |||||| ||||| |||||||| | ||||| || ||| | ||| Sbjct 146608 ACTCTCATCTTTACTAAGAAGTTCATTGGAAAAAGCTAGTCCAAGCTTTA----AATCTT 146553 Query 50040 T-TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAA 50098 | || ||||| ||||| | ||||| || ||||||||| ||||||| || || |||| Sbjct 146552 TCTTGAGCCAGAATATCAATGCAAAAGAATCAGAAAAGA---TTCCTTCAACAGCTGCAA 146496 Query 50099 AGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGCCCAAT-CG 50157 || | || | | || ||||| | | | || | | ||| | | ||| || | | Sbjct 146495 AGACTACCACACATTCACCATATGTTG---TTTC-TTTGTCCCCAGTCCAGCACAGTCCA 146440 Query 50158 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTA 50217 || |||||||| | |||||| | ||||| || ||| |||||| | | |||| || Sbjct 146439 GCTTTCTTTTTAATACAAGGTAGAGTTTCAGTGCTATTGAAGAGAAATTCCATTTCTTTT 146380 Query 50218 CTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 50277 ||||||| |||||| || || | ||||| |||||||| ||||| ||||||| || Sbjct 146379 GAGTCTTTAATATAAGTGTCAATAAGAAGAC--TACATTTCAGAATG--TGTTTTCCATA 146324 Query 50278 GCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT--GTACAAAATC 50335 | || || || || |||||||| | | ||| ||||| | || | || || | Sbjct 146323 GTAATTTGGAAGCCATAGAAACAGAAGGGTTAGGTTATCTGTATTTGTTGGTTCACCA-- 146266 Query 50336 GTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 50393 | || | || ||| |||| ||| | || |||| |||||||| || | ||||||||| Sbjct 146265 CTGCA-CCAAGTTTGCATTTACTCTGCCATCACATGCTGCAAAGAAAGTCAATACATG 146209 >seq100634 Length=30925 Score = 114 bits (126), Expect = 2e-20 Identities = 102/128 (80%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| |||| || |||||||| ||||| || ||||| || ||||| | Sbjct 3504 ACCTGAAATTCTCCTGACAGGACCCTCCGAGTATAAATGTTGCTGGTGTAAGGTTCGATG 3563 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 ||||||||||| || ||||| |||||||| || || |||||||| || || | || ||| Sbjct 3564 GATTCATTATTCCCTAAAATCTGAGCAGTAGAGGCAGTTGGCATTGGGGCAAGCAGCAAA 3623 Query 79180 CTATTTCT 79187 || ||||| Sbjct 3624 CTGTTTCT 3631 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 || ||||||||||||||||| || ||||| || || | ||| ||||| |||| || ||| Sbjct 12750 ACACGTTTCATAAAGAGATCCGGGATCCAGAGGGCAAAAAAAAGATCCCTGGCTCGCTGC 12809 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || || || || ||||| || || || ||||| | | ||||| | ||||| || Sbjct 12810 TCTTCCTTCCCAGTGTTCTTCTTCAGGTCAAGGAATTCAAAGATATCTAAGTGCCATGGC 12869 Query 80059 TCCAAGTATATGGC 80072 |||||||| ||||| Sbjct 12870 TCCAAGTAGATGGC 12883 >seq19303 Length=70460 Score = 111 bits (122), Expect = 2e-19 Identities = 240/355 (68%), Gaps = 7/355 (2%) Strand=Plus/Minus Query 47704 CCAGTTGATCCAAACCCTTGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCCTCC 47763 |||||||| ||||| |||| ||||| | || || ||||| ||| || || || Sbjct 43172 CCAGTTGAACCAAAACCTTCTGCTCCACGTTCAGTGTCATCTAAGCCTTGGACCTCTTCA 43113 Query 47764 AGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTTACA 47823 |||||||||||| | | |||| | | || ||||| || || | || ||| | || || Sbjct 43112 AGTTCTGGATAAAAAACCCGTTCACAAATCAGCTGGGCAATCCGGTCACCCTTTTTCACT 43053 Query 47824 TTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCTTCG 47883 | || || ||| ||| |||| || | || || | |||||||| |||||||| Sbjct 43052 TCAAATGTTTCTTTGCCAAAGTTAAAGAGTACAACACCAACATTTCCCCTGTAATCTTCA 42993 Query 47884 TCTATTACACCACCTCCTATATCAATG---CCTTTTAGTGACAGTCCAGACCTAGGAGCT 47940 ||||| |||||| |||| | ||| ||| |||| | || ||||| | ||||| Sbjct 42992 TCTATGACACCAGCTCCCACATCTATGAAATGTTTTGCAGCCAAGCCAGAACGTGGAGCA 42933 Query 47941 ATTCTACCATAGCAGAACTTAGGCATGGACATACTAATATCTGTCTTAATTAACTGTCTT 48000 | ||||||||| || ||| | ||||| ||| |||||||| | | || ||| Sbjct 42932 ACTCTACCATAACACCCAGGAGGGAGAGACATCTGAATGTCTGTCTTCA--CAATGGCTT 42875 Query 48001 TCTCC-TGG-AGGGATAGTATAATCGTAAGCGCTATACAAATCATATCCGGCAGC 48053 ||||| ||| || || ||| |||| || || || |||| || || || || || Sbjct 42874 TCTCCATGGCTGGTATTGTACAATCATAGGCACTGTACAGGTCGTAGCCCGCGGC 42820 >seq24704 Length=62651 Score = 107 bits (118), Expect = 3e-18 Identities = 96/119 (81%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||||||||| ||||| |||||||| || | || ||||||| || || || | Sbjct 10249 CCTCATCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCT 10190 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAG 50100 | |||| | ||||||| ||||| || |||||||||| ||||||||| || || |||||| Sbjct 10189 TGAGCC-AGATATGGATGCAAAAGAACCAGAAAAGACGATTCCTTCAACAGCTGCAAAG 10132 Score = 86.0 bits (94), Expect = 9e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 50221 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 50280 || |||| |||||| || || | |||||||||||||| ||||| |||||||| || || Sbjct 6761 TCCTTAATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCA 6702 Query 50281 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 50325 || || || || |||||||| | ||| || || | ||| |||||| Sbjct 6701 ATTTGGAAGCCATAGAAACAGCGAGCTTCAGTCACCTGTACTTCT 6657 Score = 86.0 bits (94), Expect = 9e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 49654 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 49713 ||||| ||||||||| | || ||||| || || | || || || || || ||||| ||| Sbjct 14410 GACATCACTCCCATTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCT 14351 Query 49714 TCCAATGATATATTTTCCATGAAATCAAACGGATT 49748 |||||||| ||||| ||||| |||||||| ||||| Sbjct 14350 TCCAATGAGATATTCTCCATAAAATCAAATGGATT 14316 >seq14936 Length=40044 Score = 96.9 bits (106), Expect = 5e-15 Identities = 73/86 (85%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 50457 TACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATG 50516 ||||||||| ||||||| || ||||||| |||| ||||||||| |||||||||||| | Sbjct 39864 TACTTCTTCAGCTGTCCAGAAGGATGCCTGGGCCTGTTTATACATCTTCCAGATGTCAGG 39923 Query 50517 ATATTGGATTGGGAAAATAACAAATC 50542 ||| || ||||| ||||| ||||||| Sbjct 39924 ATACTGAATTGGAAAAATGACAAATC 39949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715775410666040