Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq92824 127 3e-24 seq15296 98.7 1e-15 seq2532 96.9 5e-15 >seq92824 Length=186084 Score = 127 bits (140), Expect = 3e-24 Identities = 390/593 (66%), Gaps = 15/593 (3%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 || ||||| ||| |||||||||||| | ||||| || || || |||||||||| ||| Sbjct 146630 TTCCCCATTCAGTACCATGACATTTGGCACATGTATAAGAAAGCAGAGGCCTCCTTCTGG 146571 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 |||| || ||||| ||||| || ||||| | | | ||||| || | | |||| Sbjct 146570 ACGGCTGAGGAGGTGGATCTCTCTAAGGATATTCAGCACTGGGAAACACTGAAGCCTGA- 146512 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 ||| | | || ||||| ||| || || |||||||| | ||||| || || Sbjct 146511 --GGAGAAATACTTCATATCTCACGAGTTAGCTTTCTTTGCAGCAAGTGATGGCATAGTA 146454 Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTT 125236 || || ||| || || || ||| ||||| | | | || | ||| || || Sbjct 146453 AATGAAAATTTGGTGGAGCGGTTCAGCCAAGAAGTACAGGTGACTGAAG-CTCGCTGTTT 146395 Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296 || || |||||||| || || ||| | || || |||||||| | || ||||| Sbjct 146394 CTATGGCTTCCAAATTGCTATGGAAAACATACATTCTGAAATGTATAGTCTCCTTATTGA 146335 Query 125297 CATGTACATTCGCGATCCGCAACGTAA-ACACATGCTCTTTAACGCAATCGACACGGTGC 125355 || || ||| || || ||| | || | | | ||||| || || || || ||| ||| Sbjct 146334 CACTTATATTAAGGA-CCCCAAAGAAAGAGAATTTCTCTTCAATGCCATTGAAACGCTGC 146276 Query 125356 CGTCTATACGTAAAAAG---GCTCAATGGGTGATTCGGTGGATCGATGAC-GACAAGTCT 125411 | | | | ||||||| ||| | |||| | |||||||| | ||| || ||| | Sbjct 146275 CTTGTGT---TAAAAAGAAAGCTGACTGGGCCTTGCGGTGGATTGGGGACAGAGAAG-CA 146220 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471 | || | || | | || || || || || || || || ||||||||||| ||| | Sbjct 146219 ACATATGGTGAACGTGTTGTAGCTTTTGCGGCTGTTGAAGGAATCTTCTTTTCTGGTTCT 146160 Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531 ||||| |||| || ||||||||||| || || | ||||| || | || || Sbjct 146159 TTTGCATCCATATTCTGGCTCAAGAAACGAGGTTTAATGCCTGGGTTAACTTTTTCCAAT 146100 Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT 125584 || |||| | |||| ||||| | |||||||| |||||| | || |||| Sbjct 146099 GAACTTATTAGTAGAGATGAGGGTTTGCACTGTGATTTTGCCTGTTTAATGTT 146047 >seq15296 Length=69570 Score = 98.7 bits (108), Expect = 1e-15 Identities = 278/418 (67%), Gaps = 18/418 (4%) Strand=Plus/Minus Query 70133 ACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGACC 70192 ||||| ||||| || || || || |||||| | |||| | |||| ||||| || | ||| Sbjct 64308 ACAGATTATTCTGGGCAAGGAGTGGATCAAGTACAGAAAGTCATGGACACAATCGAAACC 64249 Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATG 70252 || || || || |||||| | ||||| | || |||||| ||| | | | ||| Sbjct 64248 AACCCTGATGACAGAAGGATCATTATGTGTGCTTGAAATCCTAAAGAACTTCCTCTGATG 64189 Query 70253 GCACTACCACCGTGTCA--CTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCAT 70310 ||||| || || || || || | || | |||| ||| ||| || ||| || | Sbjct 64188 GCACTGCCTCCATGCCATGCTCTCTGCC--AGTTCTAC--GTAT--TG---AATGGTGA- 64139 Query 70311 GCTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCT 70370 |||| | | |||| | | |||||| || |||| | || |||||||| || | Sbjct 64138 GCTTTCT-TGTCAGCTA--TACT---ATGGGCTTCAGTGTGTCATTCAACATTGCCAGTT 64085 Query 70371 ATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTAC 70430 ||| | | || |||||||||||||| | || |||||||| | || || |||| Sbjct 64084 CTTCCCTACTCACCTACATGATTGCTCACGTCACAGGCCTGAAGCCAGGTGATTTTGTAC 64025 Query 70431 ACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCG 70490 |||| | || || |||||| || | || ||||| || | | |||| || | || | Sbjct 64024 ACACTCTGGGAGATGCTCACATGCACTTCAATCATATTGTGTCATTGAAAATTCAGATTC 63965 Query 70491 AACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAAAATATTGA 70548 | | || | |||||||| || ||||| | || || |||||||||| ||||| Sbjct 63964 AGCAAGAATCAAGACCTTTCCCTAAGCTCAAAATTCTTCACAAAGTTGAAACCATTGA 63907 >seq2532 Length=66247 Score = 96.9 bits (106), Expect = 5e-15 Identities = 415/653 (64%), Gaps = 26/653 (4%) Strand=Plus/Minus Query 69893 CTACCTCTGTTGACGACCAAGACTGTCTTTGTCAAGGGCGTCATCGAGGAGCTCTTGTGG 69952 || ||| || |||| |||||| |||| || ||||| | | ||| | || ||||| Sbjct 37126 CTTCCTTTGCTGACAACCAAGCCTGTGTTCTGGAAGGGTGAGCTGGAGAAACTGCTGTGG 37067 Query 69953 ATGATTTCCGGATCGACCAATGCCAAAGAGCTGA--GCCGAAAGGGTGTACACATTTGGA 70010 | ||| || || || ||||| |||||||| ||| || ||| | | | ||| Sbjct 37066 TTTATTAAGGGTTCCACAAATGCTAAAGAGCTCTCTGCCAAAGAAGTGAAAA--TCTGGG 37009 Query 70011 GCGGCAACAGTAGTCGAAGCGTTTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCG 70070 | ||| | |||| | ||||||| || || ||||| ||| | || || | Sbjct 37008 ATGCCAATGGATCTCGAGACTTTTTGGACAAGCAGGGGTTCACTACCAGGGAGGAAGGAG 36949 Query 70071 ATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGACTGCG 70130 || |||| |||||||| || ||||||||||| || | || | | || ||| Sbjct 36948 ATTTGGGACCAGTGTATGGTTTCCAGTGGAGACATTGTGGGGCAGAATACAAAGAGATGA 36889 Query 70131 AGACAGACTATTCGGGTCAGGGTGTTGATCAATTGCAGACAATCATTGACACTCTCAAGA 70190 | ||||| ||||| || || || || |||| || ||| || | | Sbjct 36888 ACACAGATTATTCTGGGCAAGGAGTC-----ATTG-AGGCAACCA------------AAA 36847 Query 70191 CCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAA 70250 |||| || || || |||||| | ||||| | ||||||||| |||| | | | | Sbjct 36846 CCAACCCTGATGACAGAAGGATCATTATGTGTACTTGGAATCCTAAAGATCTTCCTCTGA 36787 Query 70251 TGGCACTACCACCGTGTCACTGTTTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCAT 70310 ||||||| || || | || | | ||||| || | |||| | | | | Sbjct 36786 TGGCACTGCCTCCATACCATGCTCTCTACCAGTTCTATGTATTGAATGGTGAGCTTTTTT 36727 Query 70311 GCTTAATGTATCAGAGGAGTGCCGACATGGGCCTC--GGTGTACCCTTTAACATTGCAAG 70368 | | | || ||| | ||| |||||||||||| ||||| | || |||||||| || Sbjct 36726 GTCAACTATACCAGTGATGTGGAGACATGGGCCTCCAGGTGT--CATTCAACATTGCCAG 36669 Query 70369 CTATTCTATGTTGACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGT 70428 ||||| || | || |||||||||||||||| | ||||| || | || || || Sbjct 36668 TTATTCCCTGCTCACCTACATGATTGCTCACATCCCAGGCCTAAAGTCAGGTGATTTTGT 36609 Query 70429 ACACACCATTGGCGACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACT 70488 ||||| | || || |||||| | || || ||||| || | |||| | || | || | Sbjct 36608 ACACATTCTGGGAGATGCTCACATATACTTGAATCATATTGGGCCACTGAAAATTCAGAT 36549 Query 70489 CGAACGGGAGCCGAGACCTTTTCCCAAGCTGGAGTTTGCTCGTAAAGTTGAAA 70541 | | || || |||||||| || ||||| | || || |||||||||| Sbjct 36548 TCAGCAAGAACCAAGACCTTTCCCAAAGCTCAAAATTCTTCAAAAAGTTGAAA 36496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 738486696356360