Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq100566 93.3 4e-14 seq8739 86.0 5e-12 seq62487 82.4 6e-11 >seq100566 Length=62511 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--AT 20054 || ||||| || || || |||||||| || |||||||| || |||| | || || Sbjct 20747 AAGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAG--ATAGGGTGCGACCAT 20804 Query 20055 CTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGT 20114 |||||| || || || ||| | || | |||||| ||||| ||| | ||||||||||| Sbjct 20805 CTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATGCCTTCTTTGT 20864 Query 20115 CGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGG 20174 | ||| ||| |||||| | ||| | || | || || ||| | ||| |||| Sbjct 20865 CTTGAATCTTTGCTTTCACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGG 20924 Query 20175 TTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 | ||||| ||||| || || ||||| || ||||| Sbjct 20925 TCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 20958 >seq8739 Length=53120 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||| | || | || ||||| || || || |||||||| || |||||||| || | Sbjct 865 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAC 806 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || |||||||| || || || ||| | || |||||||| ||||| ||| Sbjct 805 AGGGTACGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCCGGGGGG 746 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||||||| ||| ||| || || | ||| | || | || || | Sbjct 745 ATGCCTTCTTTGTCTTGAATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACT 686 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | ||| ||||| ||||| ||||| || || ||||| || ||||| Sbjct 685 TCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 639 >seq62487 Length=10509 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || || || ||||||||||| ||||| || || || || | ||||||| Sbjct 5835 ACCAAGTGCAGGGTGGATTCTTTTTGGATGTTCTAGTCAGACAGGGTATGCCCATCTTCC 5776 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | || || || ||| | || |||||||| || || ||| | |||||||||||| Sbjct 5775 AGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGG 5716 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || ||| || || | ||| | || | || || ||| | ||| ||||| ||| Sbjct 5715 ATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTG 5656 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || ||||| || || ||||| || |||||| Sbjct 5655 CCAGTCAAGGTCTTCACAAAGATCTGCATT 5626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418167063982791