Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2532 190 1e-43 seq15296 140 2e-28 seq20275 123 2e-23 seq25758 118 7e-22 seq109705 105 5e-18 >seq2532 Length=66247 Score = 190 bits (210), Expect = 1e-43 Identities = 390/576 (68%), Gaps = 28/576 (5%) Strand=Plus/Plus Query 25387 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGT 25446 ||||||||| ||| || || || | |||| | ||||| || | | |||| || || Sbjct 36524 TGGGAAAGG-TCTTGGTTCTTGCTGAATCTGAATTTTCAGTGGCCCAATATGATTCAAGT 36582 Query 25447 AGACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAG 25506 | | |||||| ||||||||| |||| ||||| || || | | ||| || | | || || Sbjct 36583 ATATGTGAGCATCTCCCAGAATGTGTACAAAATCACCTGACTTTAGGCCTGGGATGTGAG 36642 Query 25507 CCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGT 25566 | |||||||| ||||| || | || ||||| ||||| || | ||| || ||||||| Sbjct 36643 CAATCATGTAGGTGAGCAGGGAATAACTGGCAATGTTGAATGACACCTGGAGGCCCATGT 36702 Query 25567 CCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACAC 25626 | || | | | |||||| || ||||| | ||||| | | || || ||||| | Sbjct 36703 CTCCAC-ATCACTGGTATAGTTGACAAAAAAGCTCACCATTCAATACATAGAACTGGTAG 36761 Query 25627 ATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACG 25686 | | | | | ||||| || || || || | |||||||| ||||| | |||| Sbjct 36762 AGAGCATGGTATGGAGGCAGTGCCATCAGAGGAAGATCTTTAGGATTCCAAGTACACATA 36821 Query 25687 ATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTT--TTGCAGCTGAT 25744 ||||| | ||||| || |||||| || || |||| || | Sbjct 36822 ATGATCCTTCTGTCATCAGGGTTG------------------GTTTTGGTTGC--CTCAA 36861 Query 25745 CCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCC 25804 || || ||| || || |||| |||| || |||| ||||| || ||| |||| Sbjct 36862 TGACTCCTTGCCCAGAATAATCTGTGTTCATCTCTTTGTATTCTGCCCCACAATGTCTCC 36921 Query 25805 ACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCT-GTGCTCAAAGCCCCT-CTT 25862 ||||||| || ||||| ||||| | ||||| || ||||| || | || ||||| ||| Sbjct 36922 ACTGGAAACCATACACTGGTCCCAAATCTCCTTCCTCCCTGGTAGTGAA--CCCCTGCTT 36979 Query 25863 ATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTC 25922 ||||||||||||| || |||||||| |||||||| || || | || | |||||||| Sbjct 36980 GTCCAAAAAGTCTCGAGATCCATTGGCATCCCAGATTTTCACTTCTTTGGCAGAGAGCTC 37039 Query 25923 TTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAG 25958 ||| | |||||||| || | | ||||||||||| Sbjct 37040 TTTAGCATTTGTGGAACCCTTAATAAACCACAGCAG 37075 >seq15296 Length=69570 Score = 140 bits (154), Expect = 2e-28 Identities = 338/510 (66%), Gaps = 20/510 (4%) Strand=Plus/Plus Query 25451 GTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCAT 25510 |||||| |||||||||||||| ||||| || || || | || || || |||| ||| || Sbjct 64005 GTGAGCATCTCCCAGAGTGTGTACAAAATCACCTGGCTTCAGGCCTGTGACGTGAGCAAT 64064 Query 25511 CATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCC 25570 |||||| ||||| || | | ||||| ||||| || | || | ||| ||||| Sbjct 64065 CATGTAGGTGAGTAGGGAAGAACTGGCAATGTTGAATGACACACTGAAGCCCATA----- 64119 Query 25571 CCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACACATGG 25630 ||| |||||||| || ||||| | | ||||| ||||| || | | Sbjct 64120 ----------GTATAGCTGACAAGAAAGCTCACCATTCAATACGTAGAACTGGCAGAGAG 64169 Query 25631 TGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGA 25690 | ||| ||||| || || || || | |||||||| || || || |||| |||| Sbjct 64170 CATGGCATGGAGGCAGTGCCATCAGAGGAAGTTCTTTAGGATTTCAAGCACACATAATGA 64229 Query 25691 TGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTGTTTTGCAGCTGATCCACCC 25750 | | ||||| || |||||| ||| ||| | || || | |||||||| | Sbjct 64230 TCCTTCTGTCATCAGGGTTGGTTTCGATTGTGTCCATGACTTTCTGTACTTGATCCACTC 64289 Query 25751 CCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGA 25810 | ||| || || |||| |||| || || | || | || |||| |||||| || Sbjct 64290 CTTGCCCAGAATAATCTGTGTTCATCTCTTTGCATTCAGTCCCAAAATGTCTCCACAGGC 64349 Query 25811 ACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTG-TGCTCAAAGCCCCT-CTTATCCAA 25868 || |||| ||||| | ||||| || | ||| | | || || || ||| ||||| Sbjct 64350 GCCAC-ACACTGGTCCCAAATCTCCTTCCTTACTGGTAGTGAA--CCGCTGCTTGTCCAA 64406 Query 25869 AAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGA 25928 |||||||| || |||| || |||||||| || | || || | |||| |||||| | Sbjct 64407 AAAGTCTCAAGATCCATCAGCATCCCAGATTTTCAGTCCTTTGGCAGAGAACTCTTTAGC 64466 Query 25929 GTTTGTGGACCCTCTGACGAACCACAGCAG 25958 |||||||| | | || ||||||| ||| Sbjct 64467 ATTTGTGGAATCCTTAACAAACCACATCAG 64496 >seq20275 Length=61036 Score = 123 bits (136), Expect = 2e-23 Identities = 132/171 (77%), Gaps = 4/171 (2%) Strand=Plus/Plus Query 25772 TCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGT 25831 |||| || |||| ||||| || |||| ||||||||||| || ||||| ||||| | | Sbjct 40981 TCATCTCTTTGTATTCTGCCCCAAAATGTCTCCACTGGAAACCATACACTGGTCCCAAAT 41040 Query 25832 CTCCATCTTCCCT-GTGCTCAAAGCCCCT-CTTATCCAAAAAGTCTCTGGAACCATTGGC 25889 |||| || ||||| || | || ||||| ||| ||||||||||||| || |||||||| Sbjct 41041 CTCCTTCCTCCCTGGTAGTGAA--CCCCTGCTTGTCCAAAAAGTCTCGAGATCCATTGGC 41098 Query 25890 GTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||||||| || || || || | ||||||||||| | |||||||| || Sbjct 41099 ATCCCAGATTTTCACTCCTTTGGCAGAGAGCTCTTTAGCATTTGTGGAACC 41149 Score = 82.4 bits (90), Expect = 5e-11 Identities = 118/165 (72%), Gaps = 1/165 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || || || || | ||| |||||||| ||||| || || ||||||||||| || || Sbjct 38069 AGGCCTGTGACATGAGCAATCATGTAGGTGAGCAGGGCATAACTGGCGATGTTGAACGGC 38128 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 ||||||| ||||||| | || || | |||||| |||||||| || ||||| | | Sbjct 38129 ACCCCGAGGCCCATGT-CTCCAGAGCGCTGGTACAGCTGACAAGAAAGCTCACCATTCAG 38187 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 ||||| ||||| || | | | ||| ||||| || || || || Sbjct 38188 TACGTAGAACTGGCAGAGAGCATGGCATGGAGGCAGTGCCATCAG 38232 >seq25758 Length=7456 Score = 118 bits (130), Expect = 7e-22 Identities = 240/354 (68%), Gaps = 2/354 (1%) Strand=Plus/Minus Query 25612 ACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTATAAGGCCCAAGTCTTTAGGG 25671 || || ||||| || | | ||||| ||||| || || || || | |||| | Sbjct 2784 ACATAGAACTGGCAGAGAGCATAGCATGGAGGCAGTGCCATCAGAGAATGATTTTTACGA 2725 Query 25672 TTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCGGTG 25731 ||||| | |||| ||||| | |||| || |||||| |||| || || Sbjct 2724 TTCCAAGAACACATAATGATCCTT-TGTCATCAGGGTTGGTTTTGATTGTGTCAACGACT 2666 Query 25732 TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCT 25791 || || || |||||||| || ||| || || |||| | || || | || ||||| Sbjct 2665 TTCTGTAGTTGATCCACTCCTTTCCTGGAATAATCTGTGTTTATCTCTTTATATTCTGCC 2606 Query 25792 CCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCA 25851 || |||| ||||||||||| || |||| ||||| | ||||| ||||||||| Sbjct 2605 CCAAAATGTCTCCACTGGAAGCCATACAT-GGTCCCAAATCTCCTTCTTCCCTGGTAGTG 2547 Query 25852 AAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTC 25911 || ||| ||||||||||||||||| | |||||||| |||| ||| || || | || Sbjct 2546 AACCCCTTCTTATCCAAAAAGTCTTGAGGTCCATTGGCATCCCCGATTTTCACTGCTTTG 2487 Query 25912 TCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCC 25965 | ||||||||||| | |||||||| || | | ||||||| || ||| || Sbjct 2486 GCAGAGAGCTCTTTAGCATTTGTGGAACCATTAATAAACCACAATAGTTCCTCC 2433 >seq109705 Length=43380 Score = 105 bits (116), Expect = 5e-18 Identities = 142/195 (73%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 25772 TCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGT 25831 |||| || |||| ||||| || |||| |||||||| || || |||| |||| | | Sbjct 31220 TCATCTCTTTGTATTCTGCCCCAAAATGTCTCCACTGAAAGCCAAACACTGGTCACAAAT 31161 Query 25832 CTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGT 25891 |||| || || ||| || || |||| ||||||||||||| | |||||||| | Sbjct 31160 CTCCTTCCTCTCTGGTAGTGAACCCGTTCTTGTCCAAAAAGTCTCGAAATCCATTGGCAT 31101 Query 25892 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAAC 25950 ||||||| || || || || | || |||||||| | |||||||| ||||| | ||| Sbjct 31100 CCCAGATTTTCACTCCTTTGGCAGACAGCTCTTTAGCATTTGTGGAACCCTCA-ATAAAC 31042 Query 25951 CACAGCAGCTCCGCC 25965 |||||||| ||| || Sbjct 31041 CACAGCAGTTCCTCC 31027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338986369322403