Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq49786 87.8 9e-13 seq88447 86.0 3e-12 seq129601 84.2 1e-11 seq196575 82.4 4e-11 seq20283 82.4 4e-11 >seq49786 Length=19898 Score = 87.8 bits (96), Expect = 9e-13 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505 ||||||| ||||||| | |||||||||| ||||||| ||||||||||||| |||| Sbjct 10346 AAAATCAG-TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGC 10288 Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529 ||| |||||||||||||| |||| Sbjct 10287 TCTAACCAACTGAGCTAACCGGCC 10264 >seq88447 Length=27356 Score = 86.0 bits (94), Expect = 3e-12 Identities = 71/87 (82%), Gaps = 3/87 (3%) Strand=Plus/Plus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 ||||| ||| ||||||| | |||||||||| ||||||| ||||||||||||| | Sbjct 79 TAAAACATC---TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCA 135 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||| |||| Sbjct 136 CGCTCTAACCAACTGAGCTAACCGGCC 162 >seq129601 Length=2947 Score = 84.2 bits (92), Expect = 1e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 35 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 94 Query 11528 CCGTC 11532 || || Sbjct 95 CCCTC 99 >seq196575 Length=1006 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 785 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 844 Query 11528 CC 11529 || Sbjct 845 CC 846 >seq20283 Length=40532 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 13940 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 13881 Query 11528 CC 11529 || Sbjct 13880 CC 13879 Lambda K H 0.639 0.410 0.921 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260606156149036