Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_006144.1 Length=34246 Score E Sequences producing significant alignments: (Bits) Value seq229759 394 2e-105 >seq229759 Length=864 Score = 394 bits (436), Expect = 2e-105 Identities = 488/660 (74%), Gaps = 12/660 (2%) Strand=Plus/Plus Query 10883 CGCGTACGAGCAAACGGTCAAGGAGGAGATGAACTTCCAGAAGAGCTTCAATCATCACGT 10942 ||||||||| || ||||| || | |||| ||||| | || ||| | | ||| | Sbjct 158 CGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCT-CTTTACCAACCACCT 216 Query 10943 GCGCACGCTGATCGCGCGCGAAGAGGTGGCGATTGGCCTCATGCATCTGTGGGATTTTGT 11002 | | || || | | ||||| || |||| || | || |||||||||||||| ||||| Sbjct 217 GGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTTGT 276 Query 11003 GGAGGCGTACGT-TCAGAACCCCAGCAGCAAGCCGCTGACGGC-TCAGCTGTTCCTCATC 11060 | || | ||| |||| | ||||||||||| | ||| || |||||||| || Sbjct 277 CTTGCCGCTGGAATCA--ACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTTATA 334 Query 11061 GTGCAACACAGTCGGGACAACGAGACGTTCAGGGAGGCCATGCTGAACATCGCGGAGCCG 11120 ||||| |||| |||||||||| | |||||||| || |||| ||||| | ||||| Sbjct 335 GTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCC 394 Query 11121 GAGGGGCGCTGGCTCTTGGATCTCATTAACATCTTGCAGAGTATCGTAGTGCAGGAGCGC 11180 ||||| |||||||| | ||| | || ||||| |||| || || || |||||||||||| Sbjct 395 GAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAGCGC 454 Query 11181 TCGCTTAGCCTGGCCGACAAGGTGGCCGCCATCAACTACAGCATGCTGTCGCTGGGCAAA 11240 | | |||||||| ||||||| ||||||||| ||||| |||||| |||||||| Sbjct 455 ACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTGGGCAAG 514 Query 11241 TTTTACGCCCGCAAAATCTACAAGTCTCCGTTCGTCCCCATCGACAAGGAGGTGAAGATA 11300 |||||| ||||| | | ||| | | || | ||| ||| | || | ||||| ||||| Sbjct 515 TTTTACTCCCGCTGA-TATACCATACCCCTTACGTTCCCTTACACCACGAGGTAAAGATC 573 Query 11301 GACAGCTTTTACATGCGCATGGCGCTCAAGGTGCTGACTCTAAGCGACGACCTGGGTGTG 11360 || | || ||||||||||||| | | |||||||| || | | |||||||||| | || Sbjct 574 GAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTGAGCGTT 633 Query 11361 TACCGCAACGACCGCATCCACAAGGCGGTGAGCGCCAGCCGCCGGCGCGAGCTGAGCGAC 11420 || |||||||| ||||||||||| || ||||||| ||||| ||||||||||| |||||| Sbjct 634 TATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCGAC 693 Query 11421 CGCGAGCTTTTGCACAGCCTGCATCGGGCGTTGACTGGTGCCGGCAGCGCCGA---GGCG 11477 |||||||| ||||||||||||| |||| || |||| | ||||||| ||| | | Sbjct 694 CGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGACGATAGAGAG 753 Query 11478 GCCGA---CTACTTTGACGCCGGAGCGGACTTGCGCTGGCAGCCATCCCGACGCGCGCTG 11534 ||||| |||||||||||| || || ||| |||||||| ||| ||||||||| ||| Sbjct 754 GCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGCGCCCTG 813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109104602360256