Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq70850 134 2e-26 seq32989 95.1 2e-14 >seq70850 Length=25431 Score = 134 bits (148), Expect = 2e-26 Identities = 143/189 (76%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 10029 CTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAAA 10088 |||||||||||||| ||| |||| |||||| | ||||||| || ||| |||| Sbjct 1859 CTTACCCCATGTCCTAGTGCTTTTGTGAAGCCTGGGCCTCTGTGATGGTCTGTCTTAAAG 1800 Query 10089 AACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATCG 10148 |||||||| |||||||||||| ||||||| |||||||| | || ||||| |||||||| Sbjct 1799 AACTGGTGAGTGAAATGTTGGGCAAAAAATGCAAACATCATATTTGTGCCTTGGGGATCA 1740 Query 10149 GGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGAttt 10208 ||| | || |||| | |||||| |||||||||||| | | || || || | | Sbjct 1739 GGAATAAACTTCCTTCTCAGAAGAAATTTTTCCACAACCACTTTGGATTCAGGAAGCTCT 1680 Query 10209 tttttACCT 10217 ||||||||| Sbjct 1679 TTTTTACCT 1671 Score = 129 bits (142), Expect = 8e-25 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693 ||||| |||| ||||| ||| |||||| ||||| || |||| || | || |||||| Sbjct 7222 GTCTGCAACAACTGTTCATCATGCCATTCAGGATGCTCCTGTTTAAGGATGTCACACACT 7163 Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753 | ||| || |||| ||||| || ||||| |||||||| | ||| || ||||||||||| Sbjct 7162 CGGTTATGCTCCCGAAGCCATATTGTAGCATACATCATCAAACCTGGAACCAGGCCAAAT 7103 Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813 | ||||| || ||||| | | || || || || || | || || || ||||| | Sbjct 7102 ACTTCTTGCCCAACAGCAAATCTCAGATGCTCAGGGACATGAGGTGGGTAAATCATTTCT 7043 Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9857 ||||| |||||| || |||| ||||| | ||| || ||||| Sbjct 7042 ACCTGTGTATCTTTCACTAAGGGTGGATATACTTCTCCATCAAT 6999 >seq32989 Length=46892 Score = 95.1 bits (104), Expect = 2e-14 Identities = 176/255 (69%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 9610 TCCCCGATAATGATGAGTCGAGTGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGT 9669 || || || | |||||||| || || ||||| || || || ||| |||| || || Sbjct 40890 TCACCTATGAGGATGAGTCTGGTCGTTTGAAAGAGCTGCTCATCATTCCAGGTGGGGTGC 40831 Query 9670 TCTCGTTTCAGAACATCGCACACTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATC 9729 || | ||| | || || || | || |||||||| |||||||| ||||| |||||| Sbjct 40830 TCAGTTCTCAAGATGTCACAGACACGATTATGTTCCCTAAGCCAGATTGTAGCATACATC 40771 Query 9730 ATGAGACCAGGCACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGC 9789 ||||| || || | ||| ||||| ||||||| || ||||||| | || ||| || Sbjct 40770 ATGAGGCCTGGGAGCAGCCCAAACACCTCTTGGCCCACAGCCATCTGGTTAGCTTCAGGA 40711 Query 9790 ACTTCGGGAGGATAGATCATGTGCACCTGGACATCTTTG--ACCGAGGGGGGATACATTT 9847 || | || ||| || ||||| | | || || ||| | || || || |||||||| | Sbjct 40710 ACATTGGCAGGGTACTTCATG-GAAACTTGA-GTCTCAGCCACTGATGGTGGATACATCT 40653 Query 9848 CACCGTCAATAATCT 9862 | || || | |||| Sbjct 40652 CCCCATCCACCATCT 40638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 706065235865840