Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_006879.1 Length=34450 Score E Sequences producing significant alignments: (Bits) Value seq229759 354 2e-93 >seq229759 Length=864 Score = 354 bits (392), Expect = 2e-93 Identities = 478/659 (73%), Gaps = 10/659 (2%) Strand=Plus/Plus Query 10591 CGCGTACGAGCAGACGGTGAACGAGGAGCGCAACTTCCAAAAGAGCTTTAACAATCACGT 10650 ||||||||| || ||||||||| | || ||||| | | ||||| ||| ||| | Sbjct 158 CGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCT-CTTTACCAACCACCT 216 Query 10651 GAGGACCCTGATCGCGAGGGAGGAGGTGACCATCGGGCTGATGCATCTGTGGGACTTCGT 10710 | | || || | | | ||||| || | || | |||||||||||||||||||| || Sbjct 217 GGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTTGT 276 Query 10711 GGAGGCCTACGTGCAGAACCCGGCCAGCAAACCTCTGACGGCC-CAGCTGTTCCTGATCG 10769 | || | ||||| ||||| || || | ||| | |||||||| || | Sbjct 277 CTTG-CCGCTGGAATCAACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTTATAG 335 Query 10770 TGCAGCACAGCCGCGACAACGAGACGTTCCGCGACGCCATGTTGAACATCGCGGAGCCCG 10829 ||||||||| | ||||||||| | ||| | || || || | ||||| | ||||||| Sbjct 336 TGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCG 395 Query 10830 AGGGTCGCTGGCTCTTGGATCTGATTAACATCCTGCAGAGCATCGTGGTGCAGGAGAGGG 10889 |||| |||||||| | ||| |||| ||||| ||||| ||||| |||||||||||| | Sbjct 396 AGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAGCGCA 455 Query 10890 GCCTCAGCTTAGCGGACAAGGTGGCGGCCATTAACTATTCGATGCAGAGCCTGGGGAAGT 10949 | | ||| | || ||||||| ||| |||||||||||||| |||| | ||||| |||| Sbjct 456 CCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTGGGCAAGT 515 Query 10950 TCTACGCTCGCAAGATCTACAAGAGCCCTTACGTGCCCATAGACAAGGAGGTGAAGATAG 11009 | ||| | ||| ||| ||| | | ||||||||| ||| || || | ||||| ||||| | Sbjct 516 TTTACTCCCGCT-GATATACCATACCCCTTACGTTCCCTTACACCACGAGGTAAAGATCG 574 Query 11010 ACAGCTTTTACATGCGCATGGCGCTGAAGGTGCTGACGCTGAGCGACGACCTCGGCGTGT 11069 | | || ||||||||||||| | |||||||||| || ||| ||||||||| |||| | Sbjct 575 AGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTGAGCGTTT 634 Query 11070 ACCGTAACGACAAGATCCACAAGGCGGTGAGCGCCAGCCGCCGGCGGGAGCTGAGCGACA 11129 | || ||||| |||||||| || ||||||| ||||| ||||| ||||| |||||| Sbjct 635 ATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCGACC 694 Query 11130 GGGAGCTGATGCACAGCCTGCAGAGGGCGCTGGCGGGC---GCCGGGGACGA---GGAGC 11183 | |||||||||||||||||||| ||||| ||||| ||| | | | ||||| ||| Sbjct 695 GCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGACGATAGAGAGG 754 Query 11184 GCGAGGCTTACTTCGACATGGGAGCCGATCTGCAGTGGCGTCCCAGCGCGCGCGCCTTG 11242 |||| | ||||| ||| ||| || || |||| ||| || ||| |||||| || Sbjct 755 CCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGCGCCCTG 813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109755249544584