Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq34511 241 1e-58 seq92824 188 8e-43 seq24704 95.1 1e-14 seq14936 95.1 1e-14 >seq34511 Length=68903 Score = 241 bits (266), Expect = 1e-58 Identities = 610/919 (66%), Gaps = 21/919 (2%) Strand=Plus/Plus Query 21122 TTTATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCC 21181 || || || || || ||||| || | ||| ||| || || ||||||| | |||| Sbjct 59384 TTCATCTAGAAGTCTGCATCCAAGGTAAAAGAATTCTCAGCTGGACTTGACATCACTCCC 59443 Query 21182 ATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATA 21241 || | ||||| || | ||||| || || || || || || || |||||| |||| ||| Sbjct 59444 GTTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGATGAGATA 59503 Query 21242 GATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGAT 21301 ||||||||||||||||||||||| | | ||| || || || |||| ||||| | Sbjct 59504 TTATCCATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCTAGTTCCAAC 59563 Query 21302 AATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATC 21361 | | ||| |||||||||||||| || || || |||||| |||||||| || ||| Sbjct 59564 ATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCATTCCAATC 59623 Query 21362 AATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATT 21421 || |||||||| | ||||| || ||||| | |||||| || || || | ||| Sbjct 59624 AACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATCGATGATT 59683 Query 21422 ATATTTA-TTATCCT--AGATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACAT 21478 |||| || | || || | || | | ||| || ||||| ||||| ||||| Sbjct 59684 TCTTTTACTTTTTCTTCTGAAG-GCTTGTG---TACCAT--GTGTTTGAACATTAAACAG 59737 Query 21479 GCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCG 21538 ||||||||||| |||||||| ||||| ||||| || | ||| || ||||| ||||| || Sbjct 59738 GCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTAATCCA 59797 Query 21539 GGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATG 21598 |||||||| ||| || |||| ||| ||||| || ||||| | || |||| ||| || Sbjct 59798 GGCATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGAAGATT 59857 Query 21599 CCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATC 21658 || ||||| || ||||| || || | || || ||||| | ||| | ||| ||| Sbjct 59858 CCTTCAACAGCTGCAAAAGCTACAAGACG----CCATATGTTGCCTCTCTGTCCCCAATC 59913 Query 21659 CATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAAA 21718 ||| ||||| | || || | ||||| |||| | | |||| || || || Sbjct 59914 CATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATTGAAG 59973 Query 21719 AGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCA 21778 ||| ||| || | || | || ||||||||||||| Sbjct 59974 AGA-AATTCCCTTTTTTGGGGTCCTTAATATAAGTGTCAATAAGGAGACTATACATTTCA 60032 Query 21779 GAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACA-TCTTGCCTCTGAACATTG 21837 |||||| ||||| || || || || || || | ||||| | || || | || Sbjct 60033 ACATGTATGTTTTCCATAGCAATTTGGAAGCC--AGAAACAGGCGAGCTTCAGCGACCTG 60090 Query 21838 AACCTC-GGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAA 21896 || || | | || | | | |||| |||||||| ||||| |||||||| || |||| Sbjct 60091 TACTTCTTGGCTGAACT-GCTCCACCAAATTTTCATTAACTATGCCATCACTTGCTGCAA 60149 Query 21897 AAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCAAT-CT 21955 | || || || | || ||| || ||| | ||| | | | ||| ||| | || Sbjct 60150 AGAAAGCTAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCCCAGTGCT 60209 Query 21956 AATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTA 22015 | | ||| || || | ||| || || ||||||||||| ||| || | || || ||| Sbjct 60210 GA-ATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTCTTA 60268 Query 22016 TACATAATCCAGATATCAT 22034 ||||| ||| ||||||| Sbjct 60269 TACATGTGCCAAATATCAT 60287 >seq92824 Length=186084 Score = 188 bits (208), Expect = 8e-43 Identities = 306/446 (69%), Gaps = 0/446 (0%) Strand=Plus/Plus Query 21461 TGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCA 21520 ||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||| || | |||| Sbjct 146041 TGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCA 146100 Query 21521 TTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAAT 21580 || ||||| ||||| || |||||||| |||| || || | ||| ||||| || ||||| Sbjct 146101 TTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCAAAA 146160 Query 21581 GCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTA 21640 | || |||||||| || || ||||| || ||||| || || | |||||||| ||||| Sbjct 146161 GAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATATGTT 146220 Query 21641 GATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATT 21700 | |||| | ||| ||||| ||||| | || || | ||||| |||| | Sbjct 146221 GCTTCTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGCAGC 146280 Query 21701 GTATCAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNN 21760 || ||||| || || || ||| | | |||| | || | || Sbjct 146281 GTTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCCTTAATATAAGTGTCAATA 146340 Query 21761 NNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACAT 21820 ||||||||||||||||||||| ||||| || || || || || || || ||||| Sbjct 146341 AGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAG 146400 Query 21821 CTTGCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATT 21880 | || || | || || || || || | |||| |||||||||||||| Sbjct 146401 CGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTACTATG 146460 Query 21881 CCATCACTGGCGGCAAAAAATGCCAA 21906 |||||||| || ||||| || || || Sbjct 146461 CCATCACTTGCTGCAAAGAAAGCTAA 146486 >seq24704 Length=62651 Score = 95.1 bits (104), Expect = 1e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 21168 ttGACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTC 21227 ||||||| | ||||||| | ||||| || | ||||| || || || || || || || | Sbjct 14412 TTGACATCACTCCCATTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCC 14353 Query 21228 CTTCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATAT 21279 |||||||||| ||| ||||||||||||||||||||||| | | |||| || Sbjct 14352 CTTCCAATGAGATATTCTCCATAAAATCAAATGGATTTTCTGCTCTAAAAAT 14301 >seq14936 Length=40044 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 21127 TTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTT 21186 ||||||||| ||||| |||| ||| ||||| || | ||| || ||||| | | | Sbjct 15736 TTAAAAATCTGCATCCAATGTGAAGACATTGTCCGTTGTTTCTGCCATAACTGCAAAACG 15795 Query 21187 TTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTC 21246 ||||| || || |||||||| ||||||||||| || ||||||| || ||| ||| Sbjct 15796 CTGATATTCTGAGACCCTTTTTTCAAAAAAATTTGTTTTCCCTTCCAGAGAAATATTTTC 15855 Query 21247 CATAAAATCAAATGGATTTTCAGATTTAAA 21276 ||| |||||||| ||||| || || | ||| Sbjct 15856 CATGAAATCAAAGGGATTATCTGACTGAAA 15885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530054366211640