Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq92824 389 5e-103 seq34511 385 6e-102 seq100634 109 7e-19 seq24704 104 3e-17 seq19303 93.3 5e-14 seq14936 93.3 5e-14 >seq92824 Length=186084 Score = 389 bits (430), Expect = 5e-103 Identities = 446/599 (74%), Gaps = 3/599 (1%) Strand=Plus/Plus Query 33289 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 33348 ||||| ||||| ||||| || ||||| ||||||| |||||| ||||||||||| ||||| Sbjct 146041 TGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCA 146100 Query 33349 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33408 |||||||| || | || ||||||| || || || || ||||| |||||||| || || Sbjct 146101 TTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCAAAA 146160 Query 33409 GATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCG 33468 || |||||||||||||||||||| || || ||||| || | || | || ||||| Sbjct 146161 GAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATATGTT 146220 Query 33469 GCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 33525 || ||||| |||||| ||||| || || |||||||| |||||||||| | Sbjct 146221 GCTTCTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGCAGC 146280 Query 33526 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 33585 ||||| |||||||| |||||| | | | |||| || || |||| |||||| || || Sbjct 146281 GTTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCCTTAATATAAGTGTCAATA 146340 Query 33586 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 33645 | |||||||||||||| ||||| |||||||| || || || || || || |||||||| Sbjct 146341 AGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAG 146400 Query 33646 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATT 33705 | ||| || || | |||||||||| | || || ||| ||||||||||||| ||||| Sbjct 146401 CGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTACTATG 146460 Query 33706 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33765 || ||||| |||||||| || || || | || ||| || ||||| || || || | Sbjct 146461 CCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCTCAGGCTTC 146520 Query 33766 AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 33825 ||| | | ||| | | ||||| ||||| | ||| || || || | ||||| || || Sbjct 146521 AGTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCCAGAAGGAG 146580 Query 33826 GCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 |||||||| || |||||||||| ||| ||||||| || || || ||||| || || || Sbjct 146581 GCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTGAATGGGGAAGATGACGAA 146639 >seq34511 Length=68903 Score = 385 bits (426), Expect = 6e-102 Identities = 655/943 (69%), Gaps = 11/943 (1%) Strand=Plus/Plus Query 32946 ATTTATGTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACAT 33002 |||| ||| | || ||||| |||| || | |||| ||| || || || ||||| Sbjct 59377 ATTTCAGTTCATCTAGAAGTCTGCATCCAAGGTAAAAGAATTCTCAGCTGGACTTGACAT 59436 Query 33003 AACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAA 33062 |||||| || | || ||||| || || | || || || || || ||||| |||||| | Sbjct 59437 CACTCCCGTTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGA 59496 Query 33063 TGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAA 33122 ||| ||||| ||||| |||||||| ||||| | || ||| || |||| || | Sbjct 59497 TGAGATATTATCCATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCTAG 59556 Query 33123 TTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCAT 33182 ||| | || | ||| || || || ||||| || || ||||| | |||||||| Sbjct 59557 TTCCAACATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCAT 59616 Query 33183 TCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATC 33242 ||| || | || || || | ||| |||| | ||| || ||||| || || ||||| Sbjct 59617 TCCAATCAACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATC 59676 Query 33243 TGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAA 33302 || || | | || ||||||| || || | | ||||| ||||| || Sbjct 59677 G---ATGATTTCTTTTACTTTTTCTTCTGAAGGCTTGTGTACCATGTGTTTGAACATTAA 59733 Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| || ||||| ||||||| |||||| ||||||||||| ||||| |||||||| || | Sbjct 59734 ACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTAA 59793 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 ||| ||||||| | | | || || ||||| |||||||| || || || ||||||| ||| Sbjct 59794 TCCAGGCATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGAA 59853 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTAT 33482 ||||||||| || || ||||| || | ||| | | | | || | ||||| || Sbjct 59854 GATTCCTTCAACAGCTGCAAAAGCTACAAGACGCCATATGTTGCCT-CTCTGTCCCCAAT 59912 Query 33483 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 ||| ||||| || || |||||||| |||||||| | | |||| | |||||| || Sbjct 59913 CCATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATTGAA 59972 Query 33543 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33602 |||| | | ||| || || |||| |||||| || || | |||||||||||||| Sbjct 59973 GAGAAATTCCCTTTT-TTGGGGTCCTTAATATAAGTGTCAATAAGGAGACTATACATTTC 60031 Query 33603 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT-CTAGCCTCGGTAATCT 33661 ||| |||||||| || || || || || || ||||||| | ||| || | | || Sbjct 60032 AACATGTATGTTTTCCATAGCAATTTGGAAGCC--AGAAACAGGCGAGCTTCAGCGACCT 60089 Query 33662 GTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 33721 |||||||| | || | ||| ||||||||||||| ||||| || ||||| ||||||| Sbjct 60090 GTACTTCTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTGCTGCAA 60149 Query 33722 AAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCAT 33781 | || || || ||||| ||| || ||||| | | | | ||| | | ||| | | Sbjct 60150 AGAAAGCTAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCCCAGTGCT 60209 Query 33782 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 33841 ||||| ||||| | ||| || || || |||||| || || |||| ||| || |||| Sbjct 60210 GAATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTCTTAT 60269 Query 33842 ACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 |||||| ||| || |||| || || || ||||| |||||||| Sbjct 60270 ACATGTGCCAAATATCATGGTACTGAATGGGGAAGATAACAAA 60312 >seq100634 Length=30925 Score = 109 bits (120), Expect = 7e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| |||| || |||||||| ||||| || ||||| || ||||| | Sbjct 3504 ACCTGAAATTCTCCTGACAGGACCCTCCGAGTATAAATGTTGCTGGTGTAAGGTTCGATG 3563 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 || |||||||| || ||||| |||||||| || ||||| ||||| || || | || ||| Sbjct 3564 GATTCATTATTCCCTAAAATCTGAGCAGTAGAGGCAGTTGGCATTGGGGCAAGCAGCAAA 3623 Query 62457 CTATTTCT 62464 || ||||| Sbjct 3624 CTGTTTCT 3631 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271 || ||| ||||||||||||||||| || ||||| || || | ||| ||||| |||| || Sbjct 12746 CTCCACACGTTTCATAAAGAGATCCGGGATCCAGAGGGCAAAAAAAAGATCCCTGGCTCG 12805 Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331 || || || || || || ||||| || || || ||||| | | ||||| | ||||| Sbjct 12806 CTGCTCTTCCTTCCCAGTGTTCTTCTTCAGGTCAAGGAATTCAAAGATATCTAAGTGCCA 12865 Query 63332 CGGTTCCAAGTATATGGC 63349 || |||||||| ||||| Sbjct 12866 TGGCTCCAAGTAGATGGC 12883 >seq24704 Length=62651 Score = 104 bits (114), Expect = 3e-17 Identities = 95/119 (80%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||||||||| ||||| |||||||| || | || ||||||| || || || | Sbjct 10249 CCTCATCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCT 10190 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAG 33444 | |||| | ||||||| || || || |||||||||| ||||||||| || || |||||| Sbjct 10189 TGAGCC-AGATATGGATGCAAAAGAACCAGAAAAGACGATTCCTTCAACAGCTGCAAAG 10132 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 33565 TCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 33624 || |||| |||||| || || | |||||||||||||| ||||| |||||||| || || Sbjct 6761 TCCTTAATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCA 6702 Query 33625 ATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 33669 || || || || |||||||| | ||| || || | |||||||||| Sbjct 6701 ATTTGGAAGCCATAGAAACAGCGAGCTTCAGTCACCTGTACTTCT 6657 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/137 (74%), Gaps = 3/137 (2%) Strand=Plus/Minus Query 32959 TAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTT 33015 || ||||| |||| || | |||| ||| || | || ||||| ||||||||| | Sbjct 14452 TAGAAGTCTGCATCCAAGGTAAAAGAATTCTCAGTTGGACTTGACATCACTCCCATTCTC 14393 Query 33016 TGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCC 33075 || ||||| || || | || || || || || ||||| ||||||||||| ||||| ||| Sbjct 14392 TGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCAATGAGATATTCTCC 14333 Query 33076 ATGAAATCAAACGGATT 33092 || |||||||| ||||| Sbjct 14332 ATAAAATCAAATGGATT 14316 >seq19303 Length=70460 Score = 93.3 bits (102), Expect = 5e-14 Identities = 236/355 (66%), Gaps = 7/355 (2%) Strand=Plus/Minus Query 31048 CCTGTTGATCCAAACCCTTGATCTCCTCTATTTGTACTATCTAGAGATTGTACTTCTTCC 31107 || ||||| ||||| |||| |||| | | || ||||| ||| || ||||| Sbjct 43172 CCAGTTGAACCAAAACCTTCTGCTCCACGTTCAGTGTCATCTAAGCCTTGGACCTCTTCA 43113 Query 31108 AGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCAGTATTTACA 31167 |||||||||||| | | |||| | | || ||||| || || | || || | || || Sbjct 43112 AGTTCTGGATAAAAAACCCGTTCACAAATCAGCTGGGCAATCCGGTCACCCTTTTTCACT 43053 Query 31168 TTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCTTCG 31227 | ||| || ||| ||| |||| || | || || | |||||||| |||||||| Sbjct 43052 TCAAATGTTTCTTTGCCAAAGTTAAAGAGTACAACACCAACATTTCCCCTGTAATCTTCA 42993 Query 31228 TCTATTACACCGCCTCCTATATCAATG---CCTTTTAGGGACAGACCAGACCTAGGAGCT 31284 ||||| ||||| |||| | ||| ||| |||| | || ||||| | ||||| Sbjct 42992 TCTATGACACCAGCTCCCACATCTATGAAATGTTTTGCAGCCAAGCCAGAACGTGGAGCA 42933 Query 31285 ATTCTACCATAGCAGAACTTAGGCATGGACATACTAATATCTGTCTTAATTAACTGTCGT 31344 | ||||||||| || ||| | ||||| ||| |||||||| | | || | | Sbjct 42932 ACTCTACCATAACACCCAGGAGGGAGAGACATCTGAATGTCTGTCTTCA--CAATGGCTT 42875 Query 31345 TCTCC-TGG-AGGGATAGTATAATCGTAAGCGCTATATAAATCATATCCGGCGGC 31397 ||||| ||| || || ||| |||| || || || || | || || || ||||| Sbjct 42874 TCTCCATGGCTGGTATTGTACAATCATAGGCACTGTACAGGTCGTAGCCCGCGGC 42820 >seq14936 Length=40044 Score = 93.3 bits (102), Expect = 5e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 33801 TACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATA 33860 ||||||||| ||||||| || ||||||| |||| ||||||||| |||||||||||| Sbjct 39864 TACTTCTTCAGCTGTCCAGAAGGATGCCTGGGCCTGTTTATACATCTTCCAGATGTCAGG 39923 Query 33861 ATATTGGATTGGGAAAATAACAAATC 33886 ||| || ||||| ||||| ||||||| Sbjct 39924 ATACTGAATTGGAAAAATGACAAATC 39949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620784708876760