Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq92824 87.8 5e-12 seq2532 84.2 6e-11 >seq92824 Length=186084 Score = 87.8 bits (96), Expect = 5e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 |||||| || | || ||||| | |||||||| || ||||||||||| | ||| | Sbjct 146210 GAACGTGTTGTAGCTTTTGCGGCTGTTGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCC 146151 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || || ||||| || ||||| | | ||||| || |||| ||||| ||||| | ||| Sbjct 146150 ATATTCTGGCTCAAGAAACGAGGTTTAATGCCTGGGTTAACTTTTTCCAATGAACTTATT 146091 Query 22609 AGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 || ||||||||||| | || |||||||| ||| Sbjct 146090 AGTAGAGATGAGGGTTTGCACTGTGATTTTGCCTGT 146055 >seq2532 Length=66247 Score = 84.2 bits (92), Expect = 6e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 111364 AACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAA 111423 |||| |||||||||||| || |||||||| || || || | || ||| | || | Sbjct 37077 AACTGCTGTGGTTTATTAAGGGTTCCACAAATGCTAAAGAGCTCTCTGCCAAAGAAGTGA 37018 Query 111424 AAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGA-CAAC 111482 |||| ||||||| |||||||| || |||||| | || || || || | | || Sbjct 37017 AAATCTGGGATGCCAATGGATCTCGAGACTTTTTGGA-CAAGCAGGGGTTCACTACCAGG 36959 Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTAC 111542 || ||||| ||| | |||||||| || || || || ||| | || | ||| ||||| ||| Sbjct 36958 GAGGAAGGAGATTTGGGACCAGTGTATGGTTTCCAGTGGAGACATTGTGGGGCAGAATAC 36899 Query 111543 AAA 111545 ||| Sbjct 36898 AAA 36896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1298716043470002