Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq8739 113 4e-20 seq100566 104 2e-17 seq62487 104 2e-17 seq63886 100 2e-16 >seq8739 Length=53120 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||| || | || ||| | ||||| ||| ||| Sbjct 639 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 698 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||||| |||||||||||||| || || ||||| Sbjct 699 GACACCATTGAGAATGTCAAGGCAAAGATTCAAGACAAAGAAGGCATCCCCCCGGATCAG 758 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | || ||||| || ||||||| | | | | || || ||| Sbjct 759 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAAC 818 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || |||||||| || | || || || | | ||||| ||||| Sbjct 819 ATCCAGAAAGAATCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 865 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||| || | || ||| | ||||| ||| ||| Sbjct 411 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 470 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || |||||| |||||||||||||| || || || || Sbjct 471 GACACCATTGAGAACGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 530 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||||||||| | | ||| ||||| || ||||||| | | | | || || ||| Sbjct 531 CAGAGACTGATCTTTGCCGGGAAGCAGCTGGAAGATGGTCGCACCCTATCTGACTACAAC 590 Query 24171 ATTCAAAAAGAATCTAC 24187 || || |||||||| || Sbjct 591 ATCCAGAAAGAATCCAC 607 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || ||||| || | || ||| | ||||| ||| ||| Sbjct 183 ATGCAGATTTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTGGAGCCCAGT 242 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || |||||| |||||||||||||| || || || || Sbjct 243 GACACCATTGAGAACGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 302 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | || ||||| || ||||||| | | | | || || ||| Sbjct 303 CAGAGATTGATCTTTGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTATCTGACTACAAC 362 Query 24171 ATTCAAAAAGAATCTAC 24187 || || |||||||| || Sbjct 363 ATCCAGAAAGAATCCAC 379 >seq100566 Length=62511 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||| || | || ||| | ||||| ||| ||| Sbjct 20958 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 20899 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || ||| ||||||| |||||||||||||| || || ||||| Sbjct 20898 GACACCATTGAGAATGTGAAAGCAAAGATTCAAGACAAAGAAGGCATCCCCCCAGATCAG 20839 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | | || ||||| || ||||||| | | | | || || ||| Sbjct 20838 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTATCTGACTACAAC 20779 Query 24171 ATTCAAAAAGAATCTAC 24187 || || |||||||| || Sbjct 20778 ATCCAGAAAGAATCCAC 20762 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || ||||| || | || ||| | ||||| ||| ||| Sbjct 20730 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 20671 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | || || |||||| |||||||||||||| || || || || Sbjct 20670 GACACCATTGAGAATGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 20611 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||| |||| | | || ||||| || ||||||| | | | | || || ||| Sbjct 20610 CAGAGATTGATCTTTGCTGGAAAGCAGCTAGAAGATGGGCGTACCCTGTCTGACTACAAC 20551 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || |||||||| || |||| || || Sbjct 20550 ATCCAGAAAGAATCAACTCTTCACTTGGT 20522 >seq62487 Length=10509 Score = 104 bits (114), Expect = 2e-17 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || || ||||| || | || ||| | ||||| ||| ||| Sbjct 5626 AATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAG 5685 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||| ||| | ||||| |||||| |||||||||||||| || || || || Sbjct 5686 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCA 5745 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTAT 24167 ||||| ||||| | | || ||||| || |||||| | || | | ||| || || Sbjct 5746 GCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCATACCCTGTC--TGACTAG 5803 Query 24168 AACATTCAAAAAGAATCTAC 24187 ||||| ||||||||||| || Sbjct 5804 AACATCCAAAAAGAATCCAC 5823 >seq63886 Length=20840 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059 ||||| || || || ||||| || | || ||| | ||||| || ||| |||||||| Sbjct 20033 TTTGTGAAGACCTTGACTGGCTAAACCATCACCCTTGAAGTGGAACCCAGTGACACCATG 20092 Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119 ||| ||||| |||||| |||||||||||||| || | || || ||||| || Sbjct 20093 GAGAGTGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCTCAGAACAGCAGAGGTTG 20152 Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179 || | | || ||||| || |||||||| || | | | ||||| ||||| |||||| Sbjct 20153 ATCTTTGCTGGAAAGCAGCTAGAAGATGAGAGTACCTTGTCTGATTACAACATCCAAAAA 20212 Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| || | ||||| || || | ||||| ||||| Sbjct 20213 GAAAACACCCTGCATTTGGTCCTACGCTTGAGGGGAGG 20250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428480837405205