Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq92824 367 2e-96 seq34511 365 6e-96 seq100634 109 7e-19 seq19303 105 8e-18 seq14936 104 3e-17 seq24704 98.7 1e-15 >seq92824 Length=186084 Score = 367 bits (406), Expect = 2e-96 Identities = 441/599 (74%), Gaps = 3/599 (1%) Strand=Plus/Plus Query 32646 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 32705 ||||| ||||| ||||| || ||||| ||||| | |||||| ||||||||||| | ||| Sbjct 146041 TGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCA 146100 Query 32706 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 32765 |||||||| || | || ||||||| || || || || ||||| |||||||| ||||| Sbjct 146101 TTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCAAAA 146160 Query 32766 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCG 32825 || ||||||||||| |||||||| || |||||||| || | || | || ||||| Sbjct 146161 GAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATATGTT 146220 Query 32826 GCG---CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 32882 || ||||| |||||| ||||| || || |||||||| |||||||||| Sbjct 146221 GCTTCTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGCAGC 146280 Query 32883 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 32942 || || || ||||| |||||| | | | |||| || || |||| ||| || ||||| Sbjct 146281 GTTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCCTTAATATAAGTGTCAATA 146340 Query 32943 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCAT 33002 | |||||||||||||| ||||| |||||||| || || ||||| || || ||||| || Sbjct 146341 AGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAG 146400 Query 33003 CTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 33062 | ||| || || | |||||||||| | || || || | ||||||||||| ||||| Sbjct 146401 CGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTACTATG 146460 Query 33063 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33122 || ||||| |||||||| || || || | || ||| || ||||| || || || | Sbjct 146461 CCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCTCAGGCTTC 146520 Query 33123 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 33182 ||| | | ||| | | ||||| ||||| | |||||| || || | ||||| || || Sbjct 146521 AGTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCCAGAAGGAG 146580 Query 33183 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 |||||||| || |||||||| | ||| |||||||| || ||||| || || || || || Sbjct 146581 GCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTGAATGGGGAAGATGACGAA 146639 >seq34511 Length=68903 Score = 365 bits (404), Expect = 6e-96 Identities = 653/945 (69%), Gaps = 15/945 (2%) Strand=Plus/Plus Query 32303 ATTTATGTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACAT 32359 |||| ||| | || ||||| |||| | | |||| ||| || || || ||||| Sbjct 59377 ATTTCAGTTCATCTAGAAGTCTGCATCCAAGGTAAAAGAATTCTCAGCTGGACTTGACAT 59436 Query 32360 AACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAA 32419 |||||| || | || ||||| || || | || || || || || ||||| ||||| | Sbjct 59437 CACTCCCGTTCTCTGATATTCTCCTACTCTCTTCTCAAAGAAGTTGGTTTTCCCTTCCGA 59496 Query 32420 TGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAA 32479 ||| ||||| ||||| ||||| |||||||| | || ||| || |||| || | Sbjct 59497 TGAGATATTATCCATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAACCTAG 59556 Query 32480 TTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCAT 32539 ||| | || | ||| ||||| |||||||| || || ||||| | |||||||| Sbjct 59557 TTCCAACATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCAT 59616 Query 32540 TCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTC 32599 ||| || | || || || | ||| |||| | ||| || ||||| || || || || Sbjct 59617 TCCAATCAACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATC 59676 Query 32600 TGTTATAATAGATCTTACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAAACATC 32657 || || | ||||| ||||||| || || ||| || ||||| ||||| Sbjct 59677 G---ATGATTTCTTTTACTTTTTCTTCTGAAGGCTTGTGTACCATG--TGTTTGAACATT 59731 Query 32658 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTG 32717 ||||| || ||||| ||||| | |||||| ||||||||||| | ||| |||||||| || Sbjct 59732 AAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTT 59791 Query 32718 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAG 32777 | ||| ||||||| | | | || || ||||| |||||||| ||||| || ||||||| | Sbjct 59792 AATCCAGGCATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGG 59851 Query 32778 AAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT 32837 || |||||||| || || ||||| || | ||| | | | | || | ||||| Sbjct 59852 AAGATTCCTTCAACAGCTGCAAAAGCTACAAGACGCCATATGTTGCC-TCTCTGTCCCCA 59910 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 ||||| ||||| || || |||||||| |||||||| | | || | ||||| Sbjct 59911 ATCCATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATTG 59970 Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957 |||||| | || || || || |||| ||| || ||||| | |||||||||||| Sbjct 59971 AAGAGA-AATTCCCTTTTTTGGGGTCCTTAATATAAGTGTCAATAAGGAGACTATACATT 60029 Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCA-TCTAGCCTCGGTAAT 33016 || ||| |||||||| || || ||||| || || |||| || | ||| || | | Sbjct 60030 TCAACATGTATGTTTTCCATAGCAATTTGGAAGCC--AGAAACAGGCGAGCTTCAGCGAC 60087 Query 33017 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 33076 |||||||||| | || | || | ||||||||||| ||||| || ||||| ||||| Sbjct 60088 CTGTACTTCTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTGCTGC 60147 Query 33077 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATC 33136 ||| || || || ||||| ||| || ||||| | | | | ||| | | ||| | Sbjct 60148 AAAGAAAGCTAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCCCAGTG 60207 Query 33137 ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 33196 | ||||| ||||| | |||||| || || |||||| || || |||| ||| || || Sbjct 60208 CTGAATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTCTT 60267 Query 33197 ATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 |||||| | ||| || ||||| || ||||| || || |||||||| Sbjct 60268 ATACATGTGCCAAATATCATGGTACTGAATGGGGAAGATAACAAA 60312 >seq100634 Length=30925 Score = 109 bits (120), Expect = 7e-19 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| |||| || |||||||| ||||| || ||||| || ||||| | Sbjct 3504 ACCTGAAATTCTCCTGACAGGACCCTCCGAGTATAAATGTTGCTGGTGTAAGGTTCGATG 3563 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 || |||||||| || ||||| |||||||| || ||||| ||||| || || | || ||| Sbjct 3564 GATTCATTATTCCCTAAAATCTGAGCAGTAGAGGCAGTTGGCATTGGGGCAAGCAGCAAA 3623 Query 62312 CTATTTCT 62319 || ||||| Sbjct 3624 CTGTTTCT 3631 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126 || ||| ||||||||||||||||| || ||||| || || | ||| ||||| |||| || Sbjct 12746 CTCCACACGTTTCATAAAGAGATCCGGGATCCAGAGGGCAAAAAAAAGATCCCTGGCTCG 12805 Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186 || || || || || || ||||| || || || ||||| | | ||||| | ||||| Sbjct 12806 CTGCTCTTCCTTCCCAGTGTTCTTCTTCAGGTCAAGGAATTCAAAGATATCTAAGTGCCA 12865 Query 63187 CGGTTCCAAGTATATGGC 63204 || |||||||| ||||| Sbjct 12866 TGGCTCCAAGTAGATGGC 12883 >seq19303 Length=70460 Score = 105 bits (116), Expect = 8e-18 Identities = 239/355 (67%), Gaps = 7/355 (2%) Strand=Plus/Minus Query 30405 CCGGTTGATCCAAACCCTTGATCTCCTCTATCTGTACTATCTAGATATTGTACTTCTTTC 30464 || ||||| ||||| |||| |||| | || || ||||| ||| || |||| Sbjct 43172 CCAGTTGAACCAAAACCTTCTGCTCCACGTTCAGTGTCATCTAAGCCTTGGACCTCTTCA 43113 Query 30465 AGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCCCCCGTATTTACA 30524 |||||||||||| | | |||| | | || ||||| || || | || ||| | || || Sbjct 43112 AGTTCTGGATAAAAAACCCGTTCACAAATCAGCTGGGCAATCCGGTCACCCTTTTTCACT 43053 Query 30525 TTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCCCCTATAATCTTCG 30584 | ||||| ||| ||| |||| || | || || | ||||||||| |||||||| Sbjct 43052 TCAAATGTTTCTTTGCCAAAGTTAAAGAGTACAACACCAACATTTCCCCTGTAATCTTCA 42993 Query 30585 TCTATTACACCGCCTCCTATATCAATG---CCTTTTAGGGACAGACCAGACCTAGGAGCT 30641 ||||| ||||| |||| | ||| ||| |||| | || ||||| | ||||| Sbjct 42992 TCTATGACACCAGCTCCCACATCTATGAAATGTTTTGCAGCCAAGCCAGAACGTGGAGCA 42933 Query 30642 ATTCTACCATAGCAGAACTTAGGCATGGACATACTAATATCTGTCTTAATTAATTGTCTT 30701 | ||||||||| || ||| | ||||| ||| |||||||| | | || ||| Sbjct 42932 ACTCTACCATAACACCCAGGAGGGAGAGACATCTGAATGTCTGTCTTCA--CAATGGCTT 42875 Query 30702 TCTCC-TGG-AGGGATAGTATAATCATAAGCGCTATATAAATCATATCCGGCAGC 30754 ||||| ||| || || ||| ||||||| || || || | || || || || || Sbjct 42874 TCTCCATGGCTGGTATTGTACAATCATAGGCACTGTACAGGTCGTAGCCCGCGGC 42820 >seq14936 Length=40044 Score = 104 bits (114), Expect = 3e-17 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 33159 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 33218 |||||||| ||||||| || ||||||| |||| ||||||||| |||||||||||| || Sbjct 39865 ACTTCTTCAGCTGTCCAGAAGGATGCCTGGGCCTGTTTATACATCTTCCAGATGTCAGGA 39924 Query 33219 TATTGAATTGGAAAAATAACAAATC 33243 || |||||||||||||| ||||||| Sbjct 39925 TACTGAATTGGAAAAATGACAAATC 39949 >seq24704 Length=62651 Score = 98.7 bits (108), Expect = 1e-15 Identities = 94/119 (79%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| ||||||||||| | ||| |||||||| || | || ||||||| || || || | Sbjct 10249 CCTCATCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCT 10190 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 32801 | |||| | ||||||| ||||| || |||||||||| |||||||| || || |||||| Sbjct 10189 TGAGCC-AGATATGGATGCAAAAGAACCAGAAAAGACGATTCCTTCAACAGCTGCAAAG 10132 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 32922 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 32981 || |||| ||| || ||||| | |||||||||||||| ||||| |||||||| || || Sbjct 6761 TCCTTAATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCA 6702 Query 32982 ATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCT 33026 ||||| || || ||||| || | ||| || || | |||||||||| Sbjct 6701 ATTTGGAAGCCATAGAAACAGCGAGCTTCAGTCACCTGTACTTCT 6657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631432417795600