Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq92824 279 6e-70 seq34511 237 2e-57 seq20505 100 3e-16 seq24704 84.2 2e-11 >seq92824 Length=186084 Score = 279 bits (308), Expect = 6e-70 Identities = 453/648 (70%), Gaps = 8/648 (1%) Strand=Plus/Plus Query 93062 GGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCT 93121 || || ||||| | | ||| ||||||| || ||||| || || ||||| || ||| Sbjct 146026 GGCTTGTGTACCAGGTGTTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCT 146085 Query 93122 CGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAA 93181 | || | |||||| || ||||| || || | | ||||||||||||||||| Sbjct 146086 CTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAG 146145 Query 93182 AATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATA 93241 ||||| || |||||| ||||||||| || || ||||| || || ||||| || |||| | Sbjct 146146 AATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACA 146205 Query 93242 CGTTCGGCAAAATTTGCGGAATTACTG---CTGATCCATTTTAAAGCCCAATCGGCTTTT 93298 ||||| || | |||| | ||| | ||||| || ||||| || ||||| Sbjct 146206 CGTTCACCATATGTTGCT---TCTCTGTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTC 146262 Query 93299 TTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCT 93358 || |||| |||||| || ||||| || || || || || | |||| || | | || Sbjct 146263 TTTTTAACACAAGGCAGCGTTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCC 146322 Query 93359 CGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATT 93418 || || || || || | ||| ||||||||||||||| | || ||||| |||||| Sbjct 146323 TTAATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATT 146382 Query 93419 TGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACG 93478 ||||| || |||||||| | |||||| || | ||| |||||||| || | ||| || Sbjct 146383 TGGAAGCCATAGAAACAGCGAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACC 146442 Query 93479 AGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAA 93538 | ||||||||| ||||| ||||| ||||||||| ||||| || || ||| || Sbjct 146443 AAATTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAG 146502 Query 93539 TGTTTCTCATCATCTTTAAGCTTATCCCAAT-CGGATAGATCTTTTGAAAGATCGACTTC 93597 | |||||| ||| || || | ||||| | | || | ||| || || ||||| || || Sbjct 146503 TATTTCTCCTCAGGCTTCAGTGTTTCCCAGTGCTGA-ATATCCTTAGAGAGATCCACCTC 146561 Query 93598 TTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTG 93657 || | ||||| || || || |||||||| || ||||| | ||| ||||| || || || Sbjct 146562 CTCAGCCGTCCAGAAGGAGGCCTCTGCTTTCTTATACATGTGCCAAATGTCATGGTACTG 146621 Query 93658 AATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705 ||| || || ||||| || || || || || || || | |||||| Sbjct 146622 AATGGGGAAGATGACGAAGCGCCGGGGATTCTCCTTCAGGAGCGGCTC 146669 >seq34511 Length=68903 Score = 237 bits (262), Expect = 2e-57 Identities = 529/784 (67%), Gaps = 20/784 (3%) Strand=Plus/Plus Query 92919 ATAA-TCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGA 92977 |||| ||| || ||||||||||| |||||||| ||| ||| ||||||||||| | Sbjct 59564 ATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAATTCATTCCAATC 59623 Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037 | |||||||| ||| || || || || || | || ||| ||| || || | | Sbjct 59624 AACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAACAGCATCGAT---G 59680 Query 93038 ATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCA 93097 |||||| ||||| | | || || || ||||| | | ||| ||||||| || ||| Sbjct 59681 ATTTCTTTTACTTTTTCTTCTGAAGGCTTGTGTACCATGTGTTTGAACATTAAACAGGCA 59740 Query 93098 AAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGT 93157 || || || ||||| || |||| || | || ||| || ||||| || || Sbjct 59741 AAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAAAGTTAATCCAGGC 59800 Query 93158 AACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCT 93217 | | ||| |||||| ||||| ||||| || |||||| |||||||| || || ||| Sbjct 59801 ATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGAAAGGAAGATTCCT 59860 Query 93218 TCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG---CTGATC 93274 || || |||||||| || |||| ||| || | |||| | ||| | ||| Sbjct 59861 TCAACAGCTGCAAAAGCTACAAGACGC----CATATGTTGCC---TCTCTGTCCCCAATC 59913 Query 93275 CATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAAT 93334 ||| || ||||| || ||||| || |||| ||||||||| |||| | || || || Sbjct 59914 CATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAAAGGCATTGAAG 59973 Query 93335 AGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCA 93394 || | || | | | | || || || || || || | ||| |||||||||| Sbjct 59974 AGAAATTCCCTTTTTTGGGGTCCTTA-ATATAAGTGTCAATAAGGAGACTATACATTTCA 60032 Query 93395 GAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA-TCTAGCTTCCGTGATCTG 93453 ||| | || ||||| ||||||||||| || ||||||| | |||||| | || ||| Sbjct 60033 ACATGTATGTTTTCCATAGCAATTTGGAAGCC--AGAAACAGGCGAGCTTCAGCGACCTG 60090 Query 93454 CACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaa 93513 |||||||| || ||| || | ||||||||| ||||| ||||| ||||||||| Sbjct 60091 TACTTCTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCACTTGCTGCAAA 60150 Query 93514 aaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAAT-CGG 93572 ||||| || | ||| ||| || | ||||| | | || || | ||||| | | | Sbjct 60151 GAAAGCTAACACATGAGATATGAAGTATTTCTTCTTAGACTTCAGTGTTTCCCAGTGCTG 60210 Query 93573 ATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGT 93632 | | ||| || || ||||| || || || ||||| || || || | |||||| || | Sbjct 60211 A-ATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCTTTGCTTTCTTAT 60269 Query 93633 ACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTT 93692 |||| | ||| || || || || ||||| || || || ||||| | ||| || || | Sbjct 60270 ACATGTGCCAAATATCATGGTACTGAATGGGGAAGATAACAAAGCACCTAGTATTCTCCT 60329 Query 93693 TTAG 93696 |||| Sbjct 60330 TTAG 60333 >seq20505 Length=154428 Score = 100 bits (110), Expect = 3e-16 Identities = 245/362 (68%), Gaps = 16/362 (4%) Strand=Plus/Minus Query 93169 TTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGC 93228 |||||||||||| ||||| | |||||| | ||||||| | | ||||| || ||||| Sbjct 146554 TTTCTTGAGCCAGAATATCAATGCAAAAGAATCAGAAAAGATT---CCTTCAACAGCTGC 146498 Query 93229 AAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCA 93288 ||| | || | || ||| || | ||| || || || ||| | ||| || Sbjct 146497 AAAGACTACCACACATTCACCATATGTTG-----TTTCTT-TG-TCCCCAGTCCAGCACA 146445 Query 93289 ATCG-GCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCT 93347 || ||||| || |||||||||||||| ||||| | || || || | || | Sbjct 146444 GTCCAGCTTTCTTTTTAATACAAGGTAGAGTTTCAGTGCTATTGAAGAGAAATTCCATTT 146385 Query 93348 CGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCT 93407 | | || ||| || || || || | ||| | ||| |||||||||||||| || | Sbjct 146384 CTTTTGAGTCTTTAATATAAGTGTC-AATAAGA-AGACTACATTTCAGAATG--TGTTTT 146329 Query 93408 CCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAA 93467 |||| | ||||||||| || |||||||| | || || ||||| | || ||| | Sbjct 146328 CCATAGTAATTTGGAAGCCATAGAAACAGAAGGGTTAGGTTATCTGTATTTGTTG-GTTC 146270 Query 93468 ATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATAT 93527 | | || || | ||| |||| ||| | ||||| |||||||||| |||| ||||| || Sbjct 146269 ACCACTGCACCAAGTTTGCATTTACTCTGCCATCACATGCTGCAAAGAAAGTCAATACAT 146210 Query 93528 GC 93529 || Sbjct 146209 GC 146208 >seq24704 Length=62651 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 || || || || || | ||| ||||||||||||||| | || ||||| ||||||||| Sbjct 6755 ATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGG 6696 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462 || || |||||||| | |||||| || | ||| |||||||| Sbjct 6695 AAGCCATAGAAACAGCGAGCTTCAGTCACCTGTACTTCTTG 6655 Score = 82.4 bits (90), Expect = 8e-11 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 93165 CTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGG 93224 |||||| ||||||||| ||||| || |||||| ||||||||| || || ||||| || | Sbjct 10046 CTCGTT-CTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATTCCTTCAACAG 9988 Query 93225 CTGCAAATGCCACAATACGTTC 93246 ||||||| || |||| |||||| Sbjct 9987 CTGCAAAAGCTACAACACGTTC 9966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554927720379640