Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq100566 87.8 2e-12 >seq100566 Length=62511 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| || || |||| ||||| ||||| ||| | ||| || ||||| Sbjct 20958 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 20899 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || ||| ||| ||| |||||||||||| | ||| ||||| Sbjct 20898 GACACCATTGAGAATGTGAAAGCAAAGATTCAAGACAAAGAAGGCATCCCCCCAGATCAG 20839 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 111364 || ||| | || | ||| || || || |||||||| || | |||| | || || | Sbjct 20838 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTAT--CTGACTACA 20781 Query 111365 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 | || || |||||||| || || || || || || ||||| | ||||| Sbjct 20780 ACATCCAGAAAGAATCCACCCTGCACTTGGTCTTTCGTCTCAGAGGTGG 20732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421608177626200