Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq8739 107 2e-18 seq100566 98.7 8e-16 seq62487 98.7 8e-16 seq5191 91.5 1e-13 seq63886 86.0 5e-12 seq30062 84.2 2e-11 seq23718 84.2 2e-11 >seq8739 Length=53120 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || |||||||| || || ||||| |||||| || || || ||| Sbjct 835 GTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCCAGCTGCTTTCCA 776 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| || ||||| || |||||||||||||| ||||||| || Sbjct 775 GCAAAGATCAGCCTCTGCTGATCCGGGGGGATGCCTTCTTTGTCTTGAATCTTTGCCTTG 716 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | ||| | || ||||| |||| || Sbjct 715 ACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTC 656 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 655 TTCACAAAGATCTGCAT 639 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || |||||||| || | || ||| |||||| || || || ||| Sbjct 379 GTGGATTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGACCATCTTCCAGCTGCTTTCCA 320 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | | ||| ||||| || || |||||||||||||| |||||| || Sbjct 319 GCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGGATCTTTGCCTTC 260 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | ||| | || ||||| |||| || Sbjct 259 ACGTTCTCAATGGTGTCACTGGGCTCCACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTC 200 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 199 TTCACGAAAATCTGCAT 183 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || |||||||| || | || ||| |||||| || || || || Sbjct 607 GTGGATTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGACCATCTTCCAGCTGCTTCCCG 548 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || || |||||||||||||| |||||| || Sbjct 547 GCAAAGATCAGTCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGGATCTTTGCCTTC 488 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | ||| | || ||||| |||| || Sbjct 487 ACGTTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTC 428 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 427 TTCACAAAGATCTGCAT 411 >seq100566 Length=62511 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || |||||||| || || ||||| |||||| || || || ||| Sbjct 20534 GTTGATTCTTTCTGGATGTTGTAGTCAGACAGGGTACGCCCATCTTCTAGCTGCTTTCCA 20593 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | | ||| ||||| || || |||||||||||||| |||||| || Sbjct 20594 GCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGGATCTTTGCCTTC 20653 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | ||| | || ||||| |||| || Sbjct 20654 ACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTC 20713 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 20714 TTCACAAAGATCTGCAT 20730 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || |||||||| || |||||||| || | || ||| |||||| || || || ||| Sbjct 20762 GTGGATTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGACCATCTTCCAGCTGCTTTCCA 20821 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| | | ||| || || || || |||||||||||||| ||||||| ||| Sbjct 20822 GCAAAGATCAACCTCTGCTGATCTGGGGGGATGCCTTCTTTGTCTTGAATCTTTGCTTTC 20881 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | ||| | || ||||| |||| || Sbjct 20882 ACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTC 20941 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 20942 TTCACAAAGATCTGCAT 20958 >seq62487 Length=10509 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||||||||| ||||| || || || ||| | |||||| || || || ||| Sbjct 5823 GTGGATTCTTTTTGGATGTTCTAGTCAGACAGGGTATGCCCATCTTCCAGCTGCTTTCCA 5764 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || || |||||||||||||| |||||| || Sbjct 5763 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGGATCTTTGCCTTG 5704 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| ||| || || || | ||| | || ||||| |||| || Sbjct 5703 ACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTC 5644 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 5643 TTCACAAAGATCTGCAT 5627 >seq5191 Length=73165 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| ||||||| | | ||| | || | || ||||||||||| ||||| Sbjct 37802 ACCACCACGAAGTCTCAGGGCAAGATGAAGGGTGGTCTCCTTTTGAATGTTATAATCAGC 37743 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||||| ||||| || ||||| || || | || | | ||||| || ||||| Sbjct 37742 CAAAGTACATCCTTCTTCTAGCTGTTTGCCTGCAAACATCAATCTTTGTTGATCAGGAGG 37683 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| |||||||| || |||||| || | | ||||| || || | |||| || Sbjct 37682 AATACCTTCTTTATCCTGAATCTTGGCCTTGATCGATTCAATTGTATCAGACAATTCCAC 37623 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | ||||| || ||||||| || ||||| |||||||| Sbjct 37622 ATCAAGGGTGATGGTTTTCCCTATCAGAGTCTTCACAAATATCTGCAT 37575 >seq63886 Length=20840 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250 ||||||||| ||||||||||| || |||| |||||| || || || ||||| | Sbjct 20215 TTCTTTTTGGATGTTGTAATCAGACAAGGTACTCTCATCTTCTAGCTGCTTTCCAGCAAA 20156 Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310 ||| | | ||| || || | || |||||||||||||| |||||| || | Sbjct 20155 GATCAACCTCTGCTGTTCTGAGGGGATGCCTTCTTTGTCTTGGATCTTTGCCTTGACACT 20096 Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || | |||||| ||| ||| || || | ||| | |||| ||| |||| || || || Sbjct 20095 CTCCATGGTGTCACTGGGTTCCACTTCAAGGGTGATGGTTTAGCCAGTCAAGGTCTTCAC 20036 Query 114371 AAAAATCTGCAT 114382 |||||||| ||| Sbjct 20035 AAAAATCTACAT 20024 >seq30062 Length=48834 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||||||||| || |||| |||||| || || | |||||| || || || ||| Sbjct 31640 GTAGATTCTTTCTGGATGTAGTAATCAGACAGGGTTAGCCCATCTTCCAGCTGCTTCCCA 31581 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGA-ATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || |||| || | ||| ||| | ||||| ||| |||||||||| ||||||| || Sbjct 31580 GCAAAGATCAGTCTCTGCAGGT-CTGAGGAGATGTCTTCTTTGTCATGAATCTTTGCCTT 31522 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | |||| |||||| ||| || || || | ||| | || ||||| |||| || Sbjct 31521 GACATTTTCAGTGGTGTCACTGGGCTCTACCTCAAGGGTGATGGTCTTGCCAGTCAAGGT 31462 Query 114365 TTTTACAAAAATCTGCAT 114382 || | ||| |||||||| Sbjct 31461 CTTCATAAAGATCTGCAT 31444 >seq23718 Length=96463 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || || |||| || |||||||| | |||||||| || || ||| | |||||| Sbjct 37352 ACCAAGTGTAGGGTGGATTCTTTCCGGATGTTGTAGTCAGACAGGGTATGCCCATCTTCC 37293 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || ||||| |||| || | ||| || || || || |||||||||||||| Sbjct 37292 AGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCTTTGTCTTGG 37233 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 |||||| || | | | | |||||| ||| || || || | ||| | || ||| Sbjct 37232 ATCTTTGCCTTGACATTCTTAGTGGTGTCACTGGTCTCCACTTCAAAGGTGATGGTCTTG 37173 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| || | ||||||||||| Sbjct 37172 CCAGTCAAAGTCTTCATGAAAATCTGCAT 37144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418712411928132