Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq4507 131 4e-25 seq5191 129 1e-24 seq272715 125 2e-23 seq62487 111 4e-19 seq38522 96.9 8e-15 seq90621 89.7 1e-12 seq1300 84.2 5e-11 >seq4507 Length=158405 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| ||| ||||| ||||| || ||||| | || ||||| || ||| Sbjct 141109 AGGACCAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 141168 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || ||||| |||||||| | ||| || | ||||| || ||||||||| Sbjct 141169 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 141228 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| || ||||| || || || | || || | || || || || ||||| ||| Sbjct 141229 TGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 141288 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || |||||||| Sbjct 141289 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141320 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| ||| ||||| ||||| || ||||| | || ||||| || ||| Sbjct 141337 AGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 141396 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || ||||| |||||||| | ||| || | ||||| || ||||||||| Sbjct 141397 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 141456 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| || ||||| || || || | || || | || || || || ||||| ||| Sbjct 141457 TGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 141516 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || |||||||| Sbjct 141517 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141548 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| ||| ||||| ||||| || ||||| | || ||||| || ||| Sbjct 141565 AGGACCAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 141624 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || ||||| |||||||| | ||| || | ||||| || ||||||||| Sbjct 141625 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 141684 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| || ||||| || || || | || || | || || || || ||||| ||| Sbjct 141685 TGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 141744 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || |||||||| Sbjct 141745 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141776 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| ||| ||||| ||||| || ||||| | || ||||| || ||| Sbjct 141793 AGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 141852 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || ||||| |||||||| | ||| || | ||||| || ||||||||| Sbjct 141853 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 141912 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| || ||||| || || || | || || | || || || || ||||| ||| Sbjct 141913 TGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 141972 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || |||||||| Sbjct 141973 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142004 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| ||| ||||| ||||| || ||||| | || ||||| || ||| Sbjct 142021 AGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGGCCATCT 142080 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || ||||| |||||||| | ||| || | ||||| || ||||||||| Sbjct 142081 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 142140 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| || ||||| || || || | || || | || || || || ||||| ||| Sbjct 142141 TGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 142200 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || |||||||| Sbjct 142201 TTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142232 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || ||||||| ||| ||||| ||||| || ||||| | | ||||| || ||| Sbjct 142249 AGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAAGGTGCGGCCATCT 142308 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || | || || ||||| |||||||| | ||| || | ||||| || ||||||||| Sbjct 142309 TCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 142368 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| || ||||| || || || | || || | || || || || ||||| ||| Sbjct 142369 TGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 142428 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTATTCTAATA 288488 || || ||||| ||||| || || ||||||||| || | | | |||| Sbjct 142429 TTGCCTGTCAGGGTCTTCACAAAGATCTGCATTGTGATCTACAAATA 142475 >seq5191 Length=73165 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| || | ||||||| ||| | || ||||| || ||||| || || Sbjct 37801 CCACCACGAAGTCTCAGGGCAAGATGAAGGGTGGTCTCCTTTTGAATGTTATAATCAGCC 37742 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||| ||||||| ||||| ||||| || |||| | |||||| | || Sbjct 37741 AAAGTACATCCTTCTTCTAGCTGTTTGCCTGCAAACATCAATCTTTGTTGATCAGGAGGA 37682 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || |||||||||||||| || || || || | ||| || | ||| | |||| || Sbjct 37681 ATACCTTCTTTATCCTGAATCTTGGCCTTGATCGATTCAATTGTATCAGACAATTCCACA 37622 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| || ||||| |||||||||| || ||||||||||| ||| Sbjct 37621 TCAAGGGTGATGGTTTTCCCTATCAGAGTCTTCACAAATATCTGCATCATG 37571 >seq272715 Length=527 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || || | ||| ||||| |||||||||||||| | Sbjct 256 CCACCTCGCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 315 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||||| || ||||| |||| |||||| || | ||| Sbjct 316 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAAACGCTGCTGGTCAGGTGGA 375 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || |||||||| ||||| || || || || | || || | || || Sbjct 376 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACC 435 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || ||||| ||||| || || |||||||| Sbjct 436 TCTAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 482 >seq62487 Length=10509 Score = 111 bits (122), Expect = 4e-19 Identities = 143/196 (73%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || ||||| | || || | || ||||| | || ||||| || || Sbjct 5818 TTCTTTTTGGATGTTCTAGTCAGACAGGGTATGCCCATCTTCCAGCTGCTTTCCAGCAAA 5759 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||||| | ||| || ||| ||||| |||||||| || ||||| || || || || Sbjct 5758 GATCAGCCTCTGCTG---GTCTGGGGGGATGCCTTCTTTGTCTTGGATCTTTGCCTTGAC 5702 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | || || | |||||||| || ||||| ||||| || |||| ||||| Sbjct 5701 ATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTT 5642 Query 288459 GACGAATATCTGCATT 288474 || || ||||||||| Sbjct 5641 CACAAAGATCTGCATT 5626 >seq38522 Length=77692 Score = 96.9 bits (106), Expect = 8e-15 Identities = 162/231 (70%), Gaps = 10/231 (4%) Strand=Plus/Minus Query 288247 CCACCGCGGA-GTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||| | || | || || || |||||||| ||| |||||| ||||| || ||||| | Sbjct 17122 CCACCCCTGATGACTCAGGACAAGATGAATGGTGGATTCTTTCTGGATGTTGTAGTCAGA 17063 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || | || ||||| | || || ||||| || |||| | || ||| ||||| Sbjct 17062 TAGGATGTGGCCATCTTCCAGCTGCTTGCCTGCAAATATCAACCTCTTTTGG---TCTGG 17006 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || || ||||||||||||| ||| | || || || || |||| || || || || Sbjct 17005 ATTAATGCCCTCTTTATCCTGGAATTTGACCTTGACCTTCTCAATAGTGTCACTGGACTC 16946 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || ||||| | | || |||||| |||| || || || ||||| Sbjct 16945 TACCTCCAGGGTGATGG---TGCCTGTCAGAATCTTCACAAAGATTTGCAT 16898 >seq90621 Length=32042 Score = 89.7 bits (98), Expect = 1e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 288372 TTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAG 288431 ||| || ||||||||||| ||||| || || || |||| ||| || | ||| || || || Sbjct 17030 TTCCTTGTCCTGGATTTTGGCTTTGACATTCTCGATAGTATCACTGGGTTCAACCTCAAG 16971 Query 288432 CGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 16970 TGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 16929 >seq1300 Length=25519 Score = 84.2 bits (92), Expect = 5e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || || || | ||||||| || ||||| || |||||||| || || Sbjct 24745 CCACCACGAAGCCTCAGAGCCAGATGAAGGGTAGACTCTTTCTGAATATTATAATCAGCC 24804 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | | || || | || | || | || ||| | || Sbjct 24805 AAAGTACGTCCTTCTTCCAGCTCCTTGCCAGAAAACACCAATCTTTGATGATCAGGAGGA 24864 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||| || || || || || || |||| || | ||| |||| || Sbjct 24865 ATACCTTCCTTATCTTGAATCTTGGCCTTGACTGTTTCAATTGTATCAGATAATTCCACA 24924 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| || ||||| ||| |||||| || ||||||||||| ||| Sbjct 24925 TCAAGGGTGATGGTTTTCCCCATCAAAGTCTTCACAAATATCTGCATCATG 24975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1175456986523058