Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq272715 93.3 3e-14 seq65189 93.3 3e-14 seq100566 84.2 2e-11 >seq272715 Length=527 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||||||||||| | | || | || ||||| || ||||| || || || || || Sbjct 254 TGCCACCTCGCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTG 313 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | || || | |||||||| ||| | ||||||||||| ||||| || Sbjct 314 ACAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAAACGCTGCTGGTCAGGTG 373 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || |||||||| ||||| ||| ||| | || || || || || || | Sbjct 374 GAATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 433 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | |||| || ||||| || || ||||| || || ||||| || ||||| Sbjct 434 CCTCTAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 482 >seq65189 Length=19200 Score = 93.3 bits (102), Expect = 3e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||||||||| ||| | || |||||||| || | | | | | ||||||| || Sbjct 16164 ATGAAGGGTAGACTCTGTCTGAATGTTGTAGTCAGACAAAGTACATCCATCTTCTAGCTG 16223 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||| | | ||||| | |||||||| ||||| |||||||| ||| || || Sbjct 16224 CTTGCCCACAAACATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTATCATGTATCTT 16283 Query 15093 GCTTTTTACAATTTCTATAGTATC-GCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 | || ||| |||| |||||||| | | ||| || || | ||| |||||||| || Sbjct 16284 GGCCTTGACATTTTCAATAGTATCAGATGGTTT-GACATCAAGGGTGATGGTTTTCCCCA 16342 Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176 ||| ||| || |||||||| ||||| Sbjct 16343 TCAAAGTCTTCACAAAAATCTGCAT 16367 >seq100566 Length=62511 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || ||||| || ||||| || |||||||| || || | | | ||||| Sbjct 21206 ACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATCTTCC 21265 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | || || ||||| | ||||| | ||| ||||| || || |||||||||||| | Sbjct 21266 AGCTGCTTCCCAGCAAAAATCAATCTCTGCTGGTCTGGAGGGATGCCTTCCTTGTCATGA 21325 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 |||||| || ||| | || || || || || ||||| || | ||| ||||| || Sbjct 21326 ATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTG 21385 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||| || || ||||| || ||||| Sbjct 21386 CCAGTCAAGGTCTTCACAAAGATCTGCAT 21414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356182370031635