Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq272715 113 4e-20 seq8739 98.7 9e-16 seq23718 87.8 2e-12 >seq272715 Length=527 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || |||||||| || ||||| || || | Sbjct 256 CCACCTCGCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 315 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| ||| || |||||||| || ||| | ||||| |||||||| || || || Sbjct 316 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAAACGCTGCTGGTCAGGTGGA 375 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||||||||| |||||| |||| | || | |||||| | |||||| Sbjct 376 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACC 435 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| ||||| || || ||||| |||||||| Sbjct 436 TCTAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 482 >seq8739 Length=53120 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || ||||| || || ||||| || | |||||| ||| || Sbjct 391 ACCAAGTGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGACCATCTTCC 332 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| |||||||| ||||||||| |||||| || || || ||||| || ||||| | Sbjct 331 AGCTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGG 272 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | || | |||||| | ||| ||||| | ||| | || ||| Sbjct 271 ATCTTTGCCTTCACGTTCTCAATGGTGTCACTGGGCTCCACTTCAAGGGTGATGGTCTTG 212 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| || || || ||||||||||| Sbjct 211 CCAGTCAAGGTCTTCACGAAAATCTGCAT 183 >seq23718 Length=96463 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| |||| || || ||||| | || ||||| || || || | ||| || Sbjct 37352 ACCAAGTGTAGGGTGGATTCTTTCCGGATGTTGTAGTCAGACAGGGTATGCCCATCTTCC 37293 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| |||||||| |||||| | ||||||||| || || ||||| || ||||| | Sbjct 37292 AGCTGCTTTCCAGCAAAGATCAGCCTCTGCTGATCTGGGGGGATGCCTTCTTTGTCTTGG 37233 Query 127025 ATTTTCTGCTTGAG-TTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 || || ||||| || || | |||||| | |||| ||||| | ||| | || || Sbjct 37232 ATCTTTGCCTTGACATTCTTAGT-GGTGTCACTGGTCTCCACTTCAAAGGTGATGGTCTT 37174 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| |||| ||| || | ||||||||||| Sbjct 37173 GCCAGTCAAAGTCTTCATGAAAATCTGCAT 37144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473850152466640