Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq272715 104 2e-17 seq5191 87.8 2e-12 seq8739 84.2 2e-11 >seq272715 Length=527 Score = 104 bits (114), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 45131 CACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAG--AATCG 45188 ||| || ||||| || || || || ||||||||||| | ||||| | | | ||| Sbjct 273 CACCAGGTGCAGGGTGGACTCTTTCTGGATATTATAGT--CTGACAGAGTGCGGCCATCC 330 Query 45189 TCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCT 45248 |||| ||||| || ||| | ||||| || |||||||| || |||||||| || || ||| Sbjct 331 TCCAGCTGTTTGCCCGCGAAAATCAAACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCT 390 Query 45249 TGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 || ||||| ||||| || | |||||| | |||||| || ||||| | || Sbjct 391 TGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCTAGAGTGATGGTC 450 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||| || || || || ||||| || |||||| Sbjct 451 TTGCCCGTCAGGGTCTTCACAAAGATCTGCATC 483 >seq5191 Length=73165 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/232 (69%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATC-GCT 45172 || || || || |||| | ||||| || || | |||||||| || |||||||| || Sbjct 37801 CCACCACGAAGTCTCAGGGCAAGATGAAGGGTGGTCTCCTTTTGAATGTTATAATCAGCC 37742 Query 45173 GACGGTTTTAGAA---TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGG 45229 | | || | || || | ||||| ||||| | ||||||| ||| || || || Sbjct 37741 AAAG----TACATCCTTCTTCTAGCTGTTTGCCTGCAAACATCAATCTTTGTTGATCAGG 37686 Query 45230 CGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTC 45289 ||||| ||||||||||| ||||| || ||||||| ||| | || || || | || Sbjct 37685 AGGAATACCTTCTTTATCCTGAATCTTGGCCTTGATCGATTCAATTGTATCAGACAATTC 37626 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || | ||||| || | ||||| || ||||| || |||||| Sbjct 37625 CACATCAAGGGTGATGGTTTTCCCTATCAGAGTCTTCACAAATATCTGCATC 37574 >seq8739 Length=53120 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 ||||| || ||||| || ||||| || || || | ||| | ||| |||| || Sbjct 385 TGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGATAGGGTGCGACCATCTTCCAGCTGC 326 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| || | ||||||| |||||||| || || ||||||||||| ||||| || ||| Sbjct 325 TTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCTTCTTTGTCTTGGATCTTT 266 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 || | || | || | |||||| | ||| ||||| || || | || ||||| || Sbjct 265 GCCTTCA-CGTTCTCAATGGTGTCACTGGGCTCCACTTCAAGGGTGATGGTCTTGCCAGT 207 Query 45317 TAGAGTTTTTACAAAAATTTGCATC 45341 | || || || ||||| |||||| Sbjct 206 CAAGGTCTTCACGAAAATCTGCATC 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450434121741560