Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_012959.1 Length=34920 Score E Sequences producing significant alignments: (Bits) Value seq229759 430 3e-116 >seq229759 Length=864 Score = 430 bits (476), Expect = 3e-116 Identities = 498/666 (75%), Gaps = 20/666 (3%) Strand=Plus/Plus Query 10964 ACGGCCTACGAGCAGACGGTGAAACAGGAGCGCAACTTCCAAAAGAGTTTCAACAACCAC 11023 || || ||||| || |||||||| || || ||||| | | ||| | ||||||| Sbjct 156 ACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCTCTTT-ACCAACCAC 214 Query 11024 GTGCGCACCCTGATTGCGCGCGAGGAGGTGGCCCTGGGCCTGATGCACCTATGGGAC--- 11080 || | || || | | |||||||| |||| | | |||||||| || |||||| Sbjct 215 CTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTT 274 Query 11081 --CTGGCGGAGGCCATCGTGCAAAACCCGGACAGCAAGCCTCTGACGGCG-CAGCTGTTC 11137 || || | | ||| ||||| | |||||||| || | |||| | |||||| Sbjct 275 GTCTTGCCGCTGGAATC------AACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTC 328 Query 11138 CTGGTGGTGCAGCACAGCAGGGACAACGAGGCGTTTAGGGAGGCGCTGCTAAACATTGCC 11197 || | |||||||||| || |||||||||||| || ||||| |||||||||||||| | Sbjct 329 CTTATAGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTA 388 Query 11198 GAGCCCGAGGGTCGCTGGCTGCTGGAGCTGATTAACATCTTGCAGAGCATCGTAGTGCAG 11257 ||||||||||| ||||||||||| || |||| ||||| |||| ||||| || |||||| Sbjct 389 GAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAG 448 Query 11258 GAGCGCAGCCTGAGCCTGGCCGAGAAGGTGGCGGCGATCAACTACTCAGTGCTGAGCCTG 11317 ||||||| | |||||||||| || |||| ||| || || ||||| || |||| | ||| Sbjct 449 GAGCGCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTG 508 Query 11318 GGCAAGTTTTACGCGCGCAAGATTTACAAGACGCCGTACGTGCCCATAGACAAAGAGGTG 11377 |||||||||||| | ||| ||| ||| | || || ||||| ||| || || | ||||| Sbjct 509 GGCAAGTTTTACTCCCGC-TGATATACCATACCCCTTACGTTCCCTTACACCACGAGGTA 567 Query 11378 AAGATAGACAGCTTTTACATGCGCATGGCGCTCAAGGTGCTGACGCTGAGCGACGACCTG 11437 ||||| || | || ||||||||||||| | | |||||||| || ||| |||||||||| Sbjct 568 AAGATCGAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTG 627 Query 11438 GGCGTGTACCGCAACGACCGCATCCACAAGGCCGTGAGCACAAGCCGGCGGCGCGAGCTG 11497 |||| || |||||||| ||||||||||| ||||||||| ||||||||||||||||| Sbjct 628 AGCGTTTATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTC 687 Query 11498 AGCGACCGCGAGCTGATGCTGAGCCTGCGCCGGGC----GCTGGTAGGGG--GCGCCGCC 11551 ||||||||||||||||||| ||||||| |||| ||||| | ||| ||| || Sbjct 688 AGCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGACGAT 747 Query 11552 AGCGGCGAAGAGTCCCACTTTGACATGGGGGCGGACCTGCATTGGCAGCCGAGCCGGCGC 11611 || | | |||||| |||||||| ||| || ||||||| ||| || ||||| ||| Sbjct 748 AGAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGC 807 Query 11612 GCCTTG 11617 ||| || Sbjct 808 GCCCTG 813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 111254289626124