Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq272715 138 1e-27 seq4507 125 8e-24 seq38522 91.5 2e-13 seq24235 86.0 7e-12 >seq272715 Length=527 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | ||| | |||||| |||| || ||| || |||||||| ||||| | Sbjct 254 TGCCACCTCGCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTG 313 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||||| | || || ||||| ||||| ||||| ||||| ||||||||||| | | Sbjct 314 ACAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAAACGCTGCTGGTCAGGTG 373 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||||||| ||| || |||| || | | ||||| || | || | Sbjct 374 GAATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGCTCGA 433 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| ||||||||||| || || |||||||| ||||| Sbjct 434 CCTCTAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 482 >seq4507 Length=158405 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||||| |||||||| | || ||| || ||||| |||||||| || Sbjct 141322 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 141381 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||||||||| || || |||| | ||||||||| | || Sbjct 141382 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 141441 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || ||| ||| || ||| | || | | ||||| || | ||||| Sbjct 141442 ATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 141501 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 141502 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141548 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||||| |||||||| | || ||| || ||||| |||||||| || Sbjct 141550 CCACCTCTAAGACGCAGGACCAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 141609 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||||||||| || || |||| | ||||||||| | || Sbjct 141610 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 141669 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || ||| ||| || ||| | || | | ||||| || | ||||| Sbjct 141670 ATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 141729 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 141730 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141776 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||||| |||||||| | || ||| || ||||| |||||||| || Sbjct 141778 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 141837 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||||||||| || || |||| | ||||||||| | || Sbjct 141838 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 141897 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || ||| ||| || ||| | || | | ||||| || | ||||| Sbjct 141898 ATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 141957 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 141958 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142004 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||||| |||||||| | || ||| || ||||| |||||||| || Sbjct 142006 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 142065 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||||||||| || || |||| | ||||||||| | || Sbjct 142066 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 142125 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || ||| ||| || ||| | || | | ||||| || | ||||| Sbjct 142126 ATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 142185 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 142186 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 142232 Score = 123 bits (136), Expect = 3e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||||| |||||||| | || ||| || ||||| |||||||| || Sbjct 142234 CCACCTCTAAGACGCAGGACCAGATGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 142293 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||||| | || || ||||||||||| || || |||| | ||||||||| | || Sbjct 142294 AAGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 142353 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||| || ||| ||| || ||| | || | | ||||| || | ||||| Sbjct 142354 ATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCACC 142413 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 |||| |||||||| ||||| ||||| || || |||||||| |||||| || Sbjct 142414 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTGTG 142464 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||| | |||||||| | || ||| || ||||| |||||||| || Sbjct 141093 GCCCCCCCTAAGACGTAGGACCAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCAGA 141152 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 || ||||| | || || ||||||||||| || || |||| | ||||||||| | || Sbjct 141153 CAGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGG 141212 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || ||| || ||| ||| || ||| | || | | ||||| || | ||||| Sbjct 141213 GATGCCCTCTTTATCCTGGATTTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCCAC 141272 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 141273 CTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 141320 >seq38522 Length=77692 Score = 91.5 bits (100), Expect = 2e-13 Identities = 135/191 (71%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| |||||||| ||||| || | | || || ||||||||||| || ||| Sbjct 17085 TCTTTCTGGATGTTGTAGTCAGATAGGATGTGGCCATCTTCCAGCTGCTTGCCTGCAAAT 17026 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | || ||||| | | || ||| || ||| || || ||||| | || Sbjct 17025 ATCAACCTCTTTTGGTCTGGATTAATGCCCTCTTTATCCTGGAATTTGACCTTGACCTTC 16966 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||| || || || || |||| ||||||| |||| ||||| | || ||| Sbjct 16965 TCAATAGTGTCACTGGACTCTACCTCCAGGGTGATGG---TGCCTGTCAGAATCTTCACA 16909 Query 46583 AAGATTTGCAT 46593 ||||||||||| Sbjct 16908 AAGATTTGCAT 16898 >seq24235 Length=22748 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| |||||||| || || || | | | || || |||||||| || || || Sbjct 11269 TCTTTCTGGATGTTGTAGTCAGACAGGGTACACCCATCTTCCAGCTGCTTTCCAGCAAAG 11328 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | | ||||| | || | || || ||||| |||||| ||||| || Sbjct 11329 ATCAATCTCCTTTGGTCTGGGGGTATGCATTCTTTGTCTTGGATCTTTGCCTTGACATTC 11388 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | ||||| || | || || || | |||||||| ||||| |||| || || ||| Sbjct 11389 TCAGTGGTGTCACTGGGCTCTACTTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACA 11448 Query 46583 AAGATTTGCATT 46594 |||||||||||| Sbjct 11449 AAGATTTGCATT 11460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563276238483720