Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq272715 91.5 1e-13 >seq272715 Length=527 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| ||||||| ||| || |||| |||| ||| ||||| || |||||||| || | Sbjct 255 GCCACCTCGCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGA 314 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 || | ||| |||| |||| ||||| || | ||||| ||||||||||| || | || Sbjct 315 CAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAAAATCAAACGCTGCTGGTCAGGTGG 374 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGT--CTGCGCTTTCC 39669 | ||| || ||||| ||||| ||| | || | | |||| ||| || || Sbjct 375 AATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATGGTGTCACTGGGC--TCG 432 Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATGTC 39722 || || | ||| || || || ||||| | || || || ||||||||||| || Sbjct 433 ACCTCTAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTC 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346193891874863