Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_014899.1 Length=35203 Score E Sequences producing significant alignments: (Bits) Value seq229759 100 6e-17 >seq229759 Length=864 Score = 100 bits (110), Expect = 6e-17 Identities = 181/261 (69%), Gaps = 3/261 (1%) Strand=Plus/Plus Query 12041 GAGCCCGAGAGCCGCTGGCTCTTCGACCTGCTCGACATCCTCCAGAGCATCGTGGTCCAG 12100 ||||||||| |||||||||| |||| || | |||| || || ||||| ||||| ||| Sbjct 389 GAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAG 448 Query 12101 GAGCAGCGGCTGACGAC-GGAGGAGCGGGTGGCGGCCATCAACTACGCCGTCCTGACCCT 12159 |||| || || | | || || || ||| ||||| ||||| || | || | || Sbjct 449 GAGC-GCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCT 507 Query 12160 GGGCAAGTTTTACGCGCGTCGGGTGTACCGTACGCGGTTCGTGCCGCTCGACAAGGAGGT 12219 ||||||||||||| | || | | | |||| ||| | | ||| || | || | ||||| Sbjct 508 GGGCAAGTTTTACTCCCG-CTGATATACCATACCCCTTACGTTCCCTTACACCACGAGGT 566 Query 12220 GAAGGTGGACACTTTTTACATGCGGATGGTGCTCAAAGCGCTGGTGCTGAGCGAGGAGCT 12279 ||| | || || |||||||| |||||| | || | ||| ||| ||| || || Sbjct 567 AAAGATCGAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCT 626 Query 12280 GGGCGCGTACCGCAACGCGCG 12300 | ||| || ||||||| ||| Sbjct 627 GAGCGTTTATCGCAACGAGCG 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112156903122030