Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_015932.1 Length=31616 Score E Sequences producing significant alignments: (Bits) Value seq229759 87.8 4e-13 >seq229759 Length=864 Score = 87.8 bits (96), Expect = 4e-13 Identities = 230/347 (66%), Gaps = 7/347 (2%) Strand=Plus/Plus Query 10125 ACGGCCTATGAGCAGACAGTGAAGGAGGAGGTGAACTTTCAAACCTCCTTTAACAATAAC 10184 || || || || || || ||||| | || | ||||||| ||||| |||| ||| || Sbjct 156 ACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCTC-TTTACCAACCAC 214 Query 10185 GTGCGCACTCTCATTGCCAGAGAGGAAGTTGTTATTGGCCTAATGCACCTCTGGGACTTT 10244 || | ||||| | | | ||||| | | ||| | || ||||| || ||||||||| Sbjct 215 CTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTT 274 Query 10245 GTCCAGTCATTCCTAGAA--AACCCCCTGAGCAAGGCCCTCACCGCC-CAGCTTTTCCTT 10301 ||| | | || ||| ||||| |||||| | |||| || | || |||||| Sbjct 275 GTCTTGCCG---CTGGAATCAACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTT 331 Query 10302 ATTGTGCAACACTGCCGGGATGAGGGAGTGCTGCGGGAGAGCCTGCTGAATATCGCCCAG 10361 || ||||| ||| | ||| | | | | |||| ||||| || || | || Sbjct 332 ATAGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 391 Query 10362 CCCGAAAGCCGCTGGCTGATAGATCTGCTTAACCTCTTGCAAACTATTGTAGTGCAGGAG 10421 ||||| ||||||||||| | ||| || | ||| | |||| | || || ||||||||| Sbjct 392 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAG 451 Query 10422 CGGGGGCTGGCCCTGGGGGAGAAGGTGGCAGCCATCAATTATTCTAT 10468 || || ||||| || |||| ||| ||||| || ||||| || Sbjct 452 CGCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCAT 498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100716356797596