Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq34511 297 2e-75 seq92824 291 1e-73 seq24704 127 2e-24 >seq34511 Length=68903 Score = 297 bits (328), Expect = 2e-75 Identities = 611/895 (68%), Gaps = 23/895 (3%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| |||||| || | ||||||||||| |||| |||| || || || || || || |||| Sbjct 59434 CATCACTCCCGTTCTCTGATATTCTCCTACTC-TCTTCTCAAAGAAGTTGGTTTTCCCTT 59492 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATG 36990 | ||| ||||| |||||||||||||||||||| || || || | ||| | Sbjct 59493 CCGATGAGATATTATCCATAAAATCAAATGGATTTTCTGCTCTAAGAATCTTGCTAAAAC 59552 Query 36991 ATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTA--GTTCATA 37048 || |||| || || || || || |||||||| ||||| | ||||| || || Sbjct 59553 CTAGTTCCAACATAACTCTGTCTGCTACAAATTCAATGTACTGCTTCATTAAAGTGCAA- 59611 Query 37049 GTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTAC 37108 || || ||||| | ||||| || | || || | ||| | ||||||| | || Sbjct 59612 -TTCATTCCAATCAACTTTACAGGTAAAGCTTCAGTTAAAAACTCCTGTTCTATTTTAAC 59670 Query 37109 AGCATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAA 37168 |||||| | | | || || | |||||| | || | | | | ||| || Sbjct 59671 AGCATCGATGATTTCTTTTACTTT---TTCTTCTGAAGGCTTGTGTACCATGTGTTTGAA 59727 Query 37169 CAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAA 37228 || |||||| ||||||||||| || ||||| ||||||||||| || | ||| || ||||| Sbjct 59728 CATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCCTTGGAAAA 59787 Query 37229 GGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGA 37288 |||||||| |||||||| ||| ||| || | ||| ||||| | ||||||||| ||||| Sbjct 59788 AGTTAATCCAGGCATTAAGTCTCATTTCTTTAGCCAGAATATGGATGCAAAAGAACCAGA 59847 Query 37289 AAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTAT- 37347 || ||| || |||||||| |||||||| ||||||||||| || | |||| || | Sbjct 59848 AAGGAAGATTCCTTCAACAGCTGCAAAAGCTACAAGACG----CCATATGTTG-CCTCTC 59902 Query 37348 AATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAA 37407 || ||||||| | ||| || || || ||||||||| | |||||| Sbjct 59903 TGTCCCCAATCCATCGCAACGCCCAGTCAGCTTTCTTTTTAACACAAGGTAGCATTTCAA 59962 Query 37408 TTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAAC 37467 || || |||||||| || || || || | |||||||| ||||| || | || Sbjct 59963 AGGCATTGAAGAGAAA-TTCCCTTTTTTGGGGTCCTTAATATAAGTGTCAATAAGGAGAC 60021 Query 37468 TATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTT 37527 ||||||||||| || || ||||| ||||| || || || ||| ||| | | ||||| Sbjct 60022 TATACATTTCAACATGTATGTTTTCCATAGCAATTTGGAAGCCAGAAACA-GGCGAGCTT 60080 Query 37528 CAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCAC 37587 ||| | || || || | ||| || | || |||||||||||||| ||||||| Sbjct 60081 CAGCGACCTGTACTTCTTGGCTGAACTGCTCCACCAAATTTTCATTAACTATGCCATCAC 60140 Query 37588 TAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGA---TAATT 37644 | |||||||||||||| |||| || ||| | || |||| || || || | | Sbjct 60141 TTGCTGCAAAGAAAGC--TAACACATGAGATATGAAGTATTTCTTC-TTAGACTTCAGTG 60197 Query 37645 TTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCA 37704 ||| ||| | | |||||| || || | ||| || || ||| ||||| || ||| Sbjct 60198 TTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGTTGTCCAGAAGGAGGCCT 60257 Query 37705 ATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAA 37759 ||| |||||||| ||||||||||| | || || || || || ||||| Sbjct 60258 TTGCTTTCTTATACATGTGCCAAATATCATGGTACTGAATGGGGAAGATAACAAA 60312 >seq92824 Length=186084 Score = 291 bits (322), Expect = 1e-73 Identities = 410/573 (72%), Gaps = 2/573 (0%) Strand=Plus/Plus Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||| |||| |||||| ||||||||||| || ||||| ||||||||||| || | |||||| Sbjct 146043 TTTGAACATTAAACAGGCAAAATCACAGTGCAAACCCTCATCTCTACTAATAAGTTCATT 146102 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 ||||| ||||| || ||||||||||||| ||| || | ||| ||||| | ||||||||| Sbjct 146103 GGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGA 146162 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTG- 37341 ||||||||||| || |||||||| || ||||| ||||||| |||| ||| | |||| Sbjct 146163 ACCAGAAAAGAAGATTCCTTCAACAGCCGCAAAAGCTACAACACGTTCACCATATGTTGC 146222 Query 37342 AACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTG 37401 || | || |||||| | ||| || || || ||||||||| | | Sbjct 146223 TTCTCT-GTCCCCAATCCACCGCAAGGCCCAGTCAGCTTTCTTTTTAACACAAGGCAGCG 146281 Query 37402 TTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTA 37461 ||||||| || || |||||||| | | |||||| || | |||||||| ||||| | Sbjct 146282 TTTCAATGGCATTGAAGAGAAATTCTCTTTCTTTGGGGTCCTTAATATAAGTGTCAATAA 146341 Query 37462 GTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACC 37521 | | ||||||||||||||| || || ||||| ||||| || || || ||||| ||||| | Sbjct 146342 GGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGGAAGCCATAGAAACAGC 146401 Query 37522 TAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCC 37581 |||||||| | || || || | |||| || | || |||||||| ||||| | Sbjct 146402 GAGCTTCAGTCACCTGTACTTCTTGGCTGAACCGCTCCACCAAATTTTCATTTACTATGC 146461 Query 37582 CATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATA 37641 ||||||| |||||||||||||| | | | ||| || | | | || ||| | Sbjct 146462 CATCACTTGCTGCAAAGAAAGCTAACTCGTGAGATATGAAGTATTTCTCCTCAGGCTTCA 146521 Query 37642 ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTG 37701 | ||| ||| | | |||||| || || | ||| || || ||| | ||||| || | Sbjct 146522 GTGTTTCCCAGTGCTGAATATCCTTAGAGAGATCCACCTCCTCAGCCGTCCAGAAGGAGG 146581 Query 37702 CCAATGCACGTTTATACATCGTCCAAATATCAT 37734 || ||| |||||||| |||||| |||| Sbjct 146582 CCTCTGCTTTCTTATACATGTGCCAAATGTCAT 146614 >seq24704 Length=62651 Score = 127 bits (140), Expect = 2e-24 Identities = 107/129 (83%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259 ||||||||||| || | |||||| ||||| ||||| || ||||||||||||| ||| || Sbjct 10247 TCATCTCTACTAATAAGTTCATTGGAAAAAGTTAACCCAGGCATTAAACCTCGTTTCTTG 10188 Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319 | || | |||| | ||||||||| |||||||||| || |||||||| |||||||| ||| Sbjct 10187 AGCC-AGATATGGATGCAAAAGAACCAGAAAAGACGATTCCTTCAACAGCTGCAAA-GCT 10130 Query 37320 ACAAGACGT 37328 |||| |||| Sbjct 10129 ACAACACGT 10121 Score = 102 bits (112), Expect = 1e-16 Identities = 87/105 (83%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 37224 GAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGAT 37283 ||||| ||||| || |||||||||| || || || | ||| ||||| | ||||||||| Sbjct 10070 GAAAAAGTTAACCCAGGCATTAAAC-TCGTTCTTGAG-CCAGAATATGGATGCAAAAGAA 10013 Query 37284 CCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGT 37328 ||||||||||| || |||||||| |||||||| ||||||| |||| Sbjct 10012 CCAGAAAAGAAGATTCCTTCAACAGCTGCAAAAGCTACAACACGT 9968 Score = 91.5 bits (100), Expect = 2e-13 Identities = 78/94 (83%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| ||||||||| | ||||||||||| |||| |||| || || || || || || |||| Sbjct 14408 CATCACTCCCATTCTCTGATATTCTCCTACTC-TCTTCTCAAAGAAGTTGGTTTTCCCTT 14350 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | | ||| ||||| |||||||||||||||||||| Sbjct 14349 CCAATGAGATATTCTCCATAAAATCAAATGGATT 14316 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 |||||||| ||||| || | ||||||||||||||| || || ||||| ||||| || || Sbjct 6755 ATATAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATAGCAATTTGG 6696 Query 37506 AAACCATAAAAACACCTAGCTTCAG 37530 || ||||| ||||| | |||||||| Sbjct 6695 AAGCCATAGAAACAGCGAGCTTCAG 6671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590260638864440