Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_017825.1 Length=36711 Score E Sequences producing significant alignments: (Bits) Value seq229759 367 3e-97 >seq229759 Length=864 Score = 367 bits (406), Expect = 3e-97 Identities = 484/665 (73%), Gaps = 21/665 (3%) Strand=Plus/Plus Query 11289 ACGGCGTACGAGCAGACCGTGAAGGAGGAGAGCAACTTCCAAAAATCCTTCAACAACCAC 11348 || |||||||| || || ||||| | ||| ||||| | | || || | ||||||| Sbjct 156 ACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCTCTTT-ACCAACCAC 214 Query 11349 GTGCGCACCCTGATCGCGCGCGAGGAGGTGACCCTGGGCCTGATGCACCTGTGGGACCTG 11408 || | || || | | |||||||| || | | | |||||||| ||||||||| | Sbjct 215 CTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTT 274 Query 11409 --CTGGAGGCCATCGTGCAG--AACCCCACCAGCAAGCCGCTGACGGCG-CAGCTGTTCC 11463 || | || || | ||||| | ||||||||||| | |||| | ||||||| Sbjct 275 GTCTTGCCGC-----TGGAATCAACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCC 329 Query 11464 TGGTGGTGCAGCATAGTCGGGACAACGAGGCGTTCAGGGAGGCGCTGCTGAATATCACCG 11523 | | |||||||| | |||||||||||| |||||||| |||||||| || || | Sbjct 330 TTATAGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAG 389 Query 11524 AGCCCGAGGGCCGCTGGCTCCTGGACCTGGTGAACATTCTGCAGAGCATCGTGGTGCAGG 11583 ||||||||||||||||||| || || || | ||||||||||| ||||| |||||||||| Sbjct 390 AGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGG 449 Query 11584 AGCGCGGGCTGCCGCTGTCCGAGAAGCTGGCGGCCATCAACTTCTCGGTGCTGAGTCTGG 11643 ||||| || ||| | || ||| ||| ||||| |||| || |||| | ||||| Sbjct 450 AGCGCACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTGG 509 Query 11644 GCAAGTACTACGCTAGGAAGATCTACAAGACCCCGTACGTGCCCATAGACAAGGAGGTGA 11703 |||||| ||| | | ||| ||| | ||||| ||||| ||| || || | ||||| | Sbjct 510 GCAAGTTTTACTCCCGCT-GATATACCATACCCCTTACGTTCCCTTACACCACGAGGTAA 568 Query 11704 AGATCGACGGGTTTTACATGCGCATGACCCTGAAAGTGCTGACCCTGAGCGACGATCTGG 11763 ||||||| ||||| |||||||||||| |||| ||||| ||| ||| |||||| ||| Sbjct 569 AGATCGAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTGA 628 Query 11764 GGGTGTACCGCAACGACAGGATGCACCGCGCGGTGAGCGCCAGCAGGCGGCGCGAGCTGA 11823 | || || |||||||| | || ||| ||| ||||||| ||| ||||||||||||| | Sbjct 629 GCGTTTATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 688 Query 11824 GCGACCAGGAGCTGATGCACAGCCTGCAGCGGGCCCTGACCG----GGGCCGGGAC---- 11875 |||||| |||||||||||||||||||| |||||||| | | |||| | ||| Sbjct 689 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGACGATA 748 Query 11876 -CGAGGGGGAGAGCTACTTTGACATGGGCGCGGACCTGCACTGGCAGCCCAGCCGCCGGG 11934 |||| ||| |||||||||| |||||| ||||||| |||| || ||||| || | Sbjct 749 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGCG 808 Query 11935 CCTTG 11939 || || Sbjct 809 CCCTG 813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116966589170886