Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2532 242 3e-59 seq15296 221 1e-52 seq25758 161 8e-35 seq109705 140 3e-28 seq20275 134 1e-26 seq84504 91.5 1e-13 >seq2532 Length=66247 Score = 242 bits (268), Expect = 3e-59 Identities = 431/627 (69%), Gaps = 25/627 (4%) Strand=Plus/Plus Query 29765 TGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGT 29824 ||||||||| ||| || || || | |||| | ||||| || | | |||| || || Sbjct 36524 TGGGAAAGG-TCTTGGTTCTTGCTGAATCTGAATTTTCAGTGGCCCAATATGATTCAAGT 36582 Query 29825 AGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29884 | | |||||| |||||||| |||| ||||| || || | | ||| || | || ||||| Sbjct 36583 ATATGTGAGCATCTCCCAGAATGTGTACAAAATCACCTGACTTTAGGCCTGGGATGTGAG 36642 Query 29885 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 29944 | |||||||| ||||| || || || ||||| ||||| || | ||| ||| ||||||| Sbjct 36643 CAATCATGTAGGTGAGCAGGGAATAACTGGCAATGTTGAATGACACCTGGAGGCCCATGT 36702 Query 29945 CCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACA 30004 | || | | |||||| || ||||| | ||||| || | || || ||||| | | Sbjct 36703 CTCCACATCACTGGTATAGTTGACAAAAAAGCTCACCATTCAATACATAGAACTGGTAGA 36762 Query 30005 TGGTGTGGCACGGAGGAAGAGCCAT--GAGGCCCAAG-TCTTTGGGGTTCCAGGCGCACA 30061 | ||| | ||||| || ||||| |||| ||| ||||| || ||||| | |||| Sbjct 36763 GAGCATGGTATGGAGGCAGTGCCATCAGAGG---AAGATCTTTAGGATTCCAAGTACACA 36819 Query 30062 CGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGAT 30121 ||||| | ||||| || |||||| | || | ||| || | Sbjct 36820 TAATGATCCTTCTGTCATCAGGGTTGGTTTTGGT----------------TGC--CTCAA 36861 Query 30122 CCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCC 30181 || || ||| || || |||| |||| || |||| ||||| || |||| |||| Sbjct 36862 TGACTCCTTGCCCAGAATAATCTGTGTTCATCTCTTTGTATTCTGCCCCACAATGTCTCC 36921 Query 30182 ACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGT 30241 ||||||| || ||||| ||||||| ||||| || |||||| ||| ||| ||||| Sbjct 36922 ACTGGAAACCATACACTGGTCCCAAATCTCCTTCCTCCCTGGTAGTGAACCCCTGCTTGT 36981 Query 30242 CCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTT 30301 |||||||||||| || || ||||| |||||||| || || | || | |||||||||| Sbjct 36982 CCAAAAAGTCTCGAGATCCATTGGCATCCCAGATTTTCACTTCTTTGGCAGAGAGCTCTT 37041 Query 30302 TGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGA 30361 | | |||||||| || | | ||||||||||| | ||||| | ||||||| || | Sbjct 37042 TAGCATTTGTGGAACCCTTAATAAACCACAGCAGTTTCTCCAGCTCACCCTTCCAGAACA 37101 Query 30362 CCCTCTTGGTCGTGAGGAGGGGAAACT 30388 | |||||| || || | |||| || Sbjct 37102 CAGGCTTGGTTGTCAGCAAAGGAAGCT 37128 >seq15296 Length=69570 Score = 221 bits (244), Expect = 1e-52 Identities = 433/636 (68%), Gaps = 23/636 (4%) Strand=Plus/Plus Query 29829 GTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 29888 |||||| |||||||| ||||| ||||| || || || | || || ||||||||||| || Sbjct 64005 GTGAGCATCTCCCAGAGTGTGTACAAAATCACCTGGCTTCAGGCCTGTGACGTGAGCAAT 64064 Query 29889 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCC 29948 |||||| ||||| || || | ||||| ||||| || | || | || ||||| Sbjct 64065 CATGTAGGTGAGTAGGGAAGAACTGGCAATGTTGAATGACACACTGAAGCCCATA----- 64119 Query 29949 CGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGT 30008 ||| |||||||| || ||||| || | ||||| ||||| || | | Sbjct 64120 ---------GTATAGCTGACAAGAAAGCTCACCATTCAATACGTAGAACTGGCAGAGAGC 64170 Query 30009 GTGGCACGGAGGAAGAGCCAT--GAGGCCCAAGT-CTTTGGGGTTCCAGGCGCACACGAT 30065 ||||| ||||| || ||||| |||| |||| |||| || || || || |||| || Sbjct 64171 ATGGCATGGAGGCAGTGCCATCAGAGG---AAGTTCTTTAGGATTTCAAGCACACATAAT 64227 Query 30066 GATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCAC 30125 ||| | ||||| || |||||| | ||| ||||| | | || || | |||||||| Sbjct 64228 GATCCTTCTGTCATCAGGGTTGGTTTCGATTGTGTCCATGACTTTCTGTACTTGATCCAC 64287 Query 30126 CCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTG 30185 || ||| || || |||| |||| || || | || | || ||||| |||||| | Sbjct 64288 TCCTTGCCCAGAATAATCTGTGTTCATCTCTTTGCATTCAGTCCCAAAATGTCTCCACAG 64347 Query 30186 GAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAA 30245 | || |||| ||||||| ||||| || | ||| ||| | | ||||||||| Sbjct 64348 GCGCCAC-ACACTGGTCCCAAATCTCCTTCCTTACTGGTAGTGAACCGCTGCTTGTCCAA 64406 Query 30246 AAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGA 30305 |||||||| || || | || |||||||| || | || || | |||| |||||| | Sbjct 64407 AAAGTCTCAAGATCCATCAGCATCCCAGATTTTCAGTCCTTTGGCAGAGAACTCTTTAGC 64466 Query 30306 GTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCT 30365 |||||||| | | || ||||||| ||| |||||| || ||||||| || || Sbjct 64467 ATTTGTGGAATCCTTAACAAACCACATCAGGCCCTCCAGCACACCCTTCCAGAACACAAG 64526 Query 30366 CTTGGTCGTGAGGAGGGGAAACTGTCCCTTGAGGCCGTACATGGCCTGAGAACCAAACAC 30425 |||||| || || | ||||||| || |||| | | ||| || | ||||||| Sbjct 64527 CTTGGTTGTCAGCAAAGGAAACTCACCTCGGAGGTTGCAGCGGGCTTGCAAGCCAAACAT 64586 Query 30426 GGACA-AGACTCCCGTGCCCGTCCTGTCTCCCCTGC 30460 ||||| || | || |||||||| | ||| || ||| Sbjct 64587 GGACACAGTC-CCAGTGCCCGTGCAGTCCTCCTTGC 64621 >seq25758 Length=7456 Score = 161 bits (178), Expect = 8e-35 Identities = 298/433 (69%), Gaps = 3/433 (1%) Strand=Plus/Minus Query 29956 TGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCAC 30015 ||||||| |||| | || || || || | || || ||||| || | | | ||| Sbjct 2816 TGGTAGACCTGATAAGAAAG-TCGCCATTCAATACATAGAACTGGCAGAGAGCATAGCAT 2758 Query 30016 GGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTG 30075 ||||| || ||||| || | ||| | ||||| | |||| ||||| | || Sbjct 2757 GGAGGCAGTGCCATCAGAGAATGATTTTTACGATTCCAAGAACACATAATGATCCTT-TG 2699 Query 30076 TCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCC 30135 || || |||||| | |||| ||| ||| | || || || |||||||| || ||| Sbjct 2698 TCATCAGGGTTGGTTTTGATTGTGTCAACGACTTTCTGTAGTTGATCCACTCCTTTCCTG 2639 Query 30136 GAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTAC 30195 || || |||| | || || | || ||||| || ||||| ||||||||||| || ||| Sbjct 2638 GAATAATCTGTGTTTATCTCTTTATATTCTGCCCCAAAATGTCTCCACTGGAAGCCATAC 2579 Query 30196 ACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTG 30255 | ||||||| ||||| ||||||||| ||| ||| |||| |||||||||||| Sbjct 2578 AT-GGTCCCAAATCTCCTTCTTCCCTGGTAGTGAACCCCTTCTTATCCAAAAAGTCTTGA 2520 Query 30256 GAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGAC 30315 | || ||||| |||| ||| || || | || | ||||||||||| | |||||||| Sbjct 2519 GGTCCATTGGCATCCCCGATTTTCACTGCTTTGGCAGAGAGCTCTTTAGCATTTGTGGAA 2460 Query 30316 CCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTG 30375 || | | ||||||| || ||||||| || ||||||| || || ||||| | || Sbjct 2459 CCATTAATAAACCACAATAGTTCCTCCAGTACACCCTTCCAGAACACATTCTTGATTGTC 2400 Query 30376 AGGAGGGGAAACT 30388 || | ||||||| Sbjct 2399 AGCAAAGGAAACT 2387 >seq109705 Length=43380 Score = 140 bits (154), Expect = 3e-28 Identities = 177/241 (73%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 30149 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30208 |||| || |||| ||||| || ||||| |||||||| || || |||| |||| || | Sbjct 31220 TCATCTCTTTGTATTCTGCCCCAAAATGTCTCCACTGAAAGCCAAACACTGGTCACAAAT 31161 Query 30209 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268 |||| || || ||| ||| || |||||||||||||||||| | || ||||| | Sbjct 31160 CTCCTTCCTCTCTGGTAGTGAACCCGTTCTTGTCCAAAAAGTCTCGAAATCCATTGGCAT 31101 Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGACGAAC 30327 ||||||| || || || || | || |||||||| | |||||||| ||||| | ||| Sbjct 31100 CCCAGATTTTCACTCCTTTGGCAGACAGCTCTTTAGCATTTGTGGAACCCTCA-ATAAAC 31042 Query 30328 CACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAAC 30387 |||||||| ||||||| || ||||||| || || | ||| | || | || |||||| Sbjct 31041 CACAGCAGTTCCTCCAGCACACCCTTCCAGAACACACGGTTGATTGTAGGCAGAGGAAAC 30982 Query 30388 T 30388 | Sbjct 30981 T 30981 >seq20275 Length=61036 Score = 134 bits (148), Expect = 1e-26 Identities = 131/169 (78%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 30149 TCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGT 30208 |||| || |||| ||||| || ||||| ||||||||||| || ||||| ||||||| | Sbjct 40981 TCATCTCTTTGTATTCTGCCCCAAAATGTCTCCACTGGAAACCATACACTGGTCCCAAAT 41040 Query 30209 CTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGT 30268 |||| || |||||| ||| ||| ||||||||||||||||| || || ||||| | Sbjct 41041 CTCCTTCCTCCCTGGTAGTGAACCCCTGCTTGTCCAAAAAGTCTCGAGATCCATTGGCAT 41100 Query 30269 CCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 ||||||| || || || || | ||||||||||| | |||||||| || Sbjct 41101 CCCAGATTTTCACTCCTTTGGCAGAGAGCTCTTTAGCATTTGTGGAACC 41149 Score = 120 bits (132), Expect = 2e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || ||||| ||||| |||||||| ||||| || | || ||||||||||| || || Sbjct 38069 AGGCCTGTGACATGAGCAATCATGTAGGTGAGCAGGGCATAACTGGCGATGTTGAACGGC 38128 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 |||||||| |||||||| || || | |||||| |||||||| || ||||| || | Sbjct 38129 ACCCCGAGGCCCATGTCTCCAGAGCGCTGGTACAGCTGACAAGAAAGCTCACCATTCAGT 38188 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032 ||||| ||||| || | | ||||| ||||| || ||||| || Sbjct 38189 ACGTAGAACTGGCAGAGAGCATGGCATGGAGGCAGTGCCATCAG 38232 >seq84504 Length=29057 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161 || || || |||||||| |||| || ||||||||| | | ||||| |||||| || || Sbjct 22679 TTCAGTTCTCTGCTGAGAACTAAATTAATCCTGTCTTTTAAAGGTCGATTCTTCTCAGGA 22738 Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 ||||||||||||||||| | |||||||||| | ||||| || ||| Sbjct 22739 ATGGAGAACCAAGTCTTCTTTCCCATTATCAAGAGATTCTGTTTACCT 22786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407234591721803