Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq19303 109 4e-19 seq63886 82.4 6e-11 >seq19303 Length=70460 Score = 109 bits (120), Expect = 4e-19 Identities = 184/264 (70%), Gaps = 12/264 (5%) Strand=Plus/Minus Query 9000 ACCGGTTGACCCAAACCCTCCCTCTCCGCGATTGGTGTCA-----GTCGTGGAAGTAACC 9054 ||| ||||| ||||| ||| | |||| || | |||||| | | |||| || Sbjct 43173 ACCAGTTGAACCAAAACCTTCTGCTCCACGTTCAGTGTCATCTAAGCCTTGGA-----CC 43119 Query 9055 TCTACCAGTGTGGGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTA 9114 ||| | ||| |||||||| | |||||||||| | || ||||||| ||| ||||| Sbjct 43118 TCTTCAAGTTCTGGATAAAAAACCCGTTCACAAATCAGCTGGGCAATCCGGTCACCCTTT 43059 Query 9115 TTCACGACAAA-GTCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTA 9173 ||||| |||| || | | | || | || || || || || || || || |||||||| Sbjct 43058 TTCACTTCAAATGTTTCTTTGCCAAAG-TTAAAGAGTACAACACCAACATTTCCCCTGTA 43000 Query 9174 ATCCTCATCGATCACACCAGCACCCACGTCGATGAAGTGCTTGACCGCTAGTCCAGAGCG 9233 ||| ||||| || |||||||| ||||| || ||||| || || | || | ||||| || Sbjct 42999 ATCTTCATCTATGACACCAGCTCCCACATCTATGAAATGTTTTGCAGCCAAGCCAGAACG 42940 Query 9234 GGGCGCGATTCGACCGTAGCATCC 9257 || || | || ||| || || || Sbjct 42939 TGGAGCAACTCTACCATAACACCC 42916 >seq63886 Length=20840 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | || | |||||||| || ||| | |||||||| || ||||||||||| Sbjct 20250 CCTCCCCTCAAGCGTAGGACCAAATGCAGGGTGTTTTCTTTTTGGATGTTGTAATCAGAC 20191 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | | || || || | |||||| || ||||| |||| | ||| || || | ||| Sbjct 20190 AAGGTACTCTCATCTTCTAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGTTCTGAGGGG 20131 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| || ||||| |||||| || ||| ||| | || | ||||| Sbjct 20130 ATGCCTTCTTTGTCTTGGATCTTTGCCTTGACACTCTCCATGGTGTCACTGGGTTCCACT 20071 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || |||| || ||||| || || |||||||||| |||| Sbjct 20070 TCAAGGGTGATGGTTTAGCCAGTCAAGGTCTTCACAAAAATCTACATC 20023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379648277527653