Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7528 98.7 2e-15 seq14936 87.8 3e-12 >seq7528 Length=80901 Score = 98.7 bits (108), Expect = 2e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558 ||||| || ||||||||||| |||||||| || ||||| | ||||| |||| || Sbjct 57583 TTCACCTTTTCCTCCAGCCGGGCGATGCGCTCGAGTTTCCTTTTCCGGCACTTGGACGCA 57524 Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618 || | |||||||| | || ||| | || ||||||||||| |||||| |||||||||| Sbjct 57523 GCGATGCGGTTCCTCATTCGCTTCCTCTCGGCCTTGATGCGCTCCTGGGACTCCATGTCG 57464 Query 241619 ATCGGAGAC 241627 || || ||| Sbjct 57463 ATAGGGGAC 57455 >seq14936 Length=40044 Score = 87.8 bits (96), Expect = 3e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || || | ||||||||| | |||||||| |||||||||||| | || |||| || Sbjct 20548 TCATCTCTGCTGATGAGTTCATTGGAGAAAGTGAGACCAGGCATAAGACCTCTCTTCTTA 20607 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270 |||||||| || || || |||||||| |||||||| || || ||||| || || || Sbjct 20608 AGCCAGAATATAGCAGCAAAAGAGCCCGAGAAGAAAATCCCTTCCACAGCAGCAAA 20663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928299088682240