Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq16086 132 6e-26 >seq16086 Length=44603 Score = 132 bits (146), Expect = 6e-26 Identities = 607/958 (63%), Gaps = 5/958 (1%) Strand=Plus/Plus Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106 |||| ||||| || || | ||| ||||| || || |||||| || || ||||| Sbjct 31459 TGTCTTAGATGCTCCTCTAAACACTGGACTGCAAAAGAGTCAACATCAGTATCAAATTTG 31518 Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166 || || || | |||| | ||| | || ||||||| | |||||| ||| ||||| Sbjct 31519 TTGGCAAAGAAATGGGGCT-GTT--GCAGCATCCAGTTTAAGTCTCCTACCCCAAACACA 31575 Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226 || || ||||| | ||| | || | || || || || ||||||| || | ||| Sbjct 31576 CATACAGAACGCACGTGAATCCCACTACATGGTGGATATGGAGCTCCCTTGAAAATGTCT 31635 Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286 ||||| |||| |||||||||||||||| || | || |||||||| || || || Sbjct 31636 CCTTCTAAGTATTGCCACTTCACAAACCGAGCAACTGCGTGCATGTCAGAAACATCATAC 31695 Query 160287 TTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGG 160346 || | | | || ||||| ||||| ||| || | || | |||||||| | Sbjct 31696 TTATTACTGGAAGAAAGTGCACCTGGAACTTGGGGGATTCTTTGAATTGTGGCCCATAAA 31755 Query 160347 TGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCC 160406 | ||| || |||||||| || || |||| ||| || || || | ||| || | Sbjct 31756 TATTCATCTGGGCTGTATGTATCTTTAGCCCACTCAATAAATTTCAGGATCTTCCCATTA 31815 Query 160407 CGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATC 160466 || || | || || || | || ||||| || || ||||| || || || Sbjct 31816 GTTAGGACATACTCTACATACTTCCTACTAACAACAAAATAGGCACTGCCAGAAAAAATT 31875 Query 160467 GGTATGGGTATAGGCGG-CGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCAC 160525 ||| | || || || ||| | || || | || ||||| | | || | | Sbjct 31876 GGTGTTTCAATCGGAGGAAGTGGC-TTATCTTTCCCTGTGTTTTTTAACTTGCCATCAAT 31934 Query 160526 CAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAG 160585 | | | ||||||||||||| || || || | ||||| || || |||| Sbjct 31935 GACTTCATAATGCTTCTTCCACCTAACTTCTTTATGGGAAGGCATTTTCTCAGTTTCTAA 31994 Query 160586 ACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGG 160645 ||||| || | || || |||| | | || || || || || || | || Sbjct 31995 GCTGTTTCCATTCATTAAAGACTTTAGCTTCCGTATCATTTCCAGATTGGTTTTAATAGG 32054 Query 160646 AAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTC 160705 || || |||| || | ||||||| || |||||||| | ||| | || || || Sbjct 32055 GAAATCCATACCACAAAGATTTATCAAATAGTTCCATTTTGAACTCTGTCTGTAGAGATC 32114 Query 160706 CCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAG 160765 |||||||| || | ||||| || || | ||||| || || ||||| || | || | Sbjct 32115 TCTCATGCAGTTGAGGTCTGCTTGGACCCTACTCCATGATGCATACACGACCCTTTCCAA 32174 Query 160766 TTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAA 160825 || |||||| | ||||| |||| |||||| || | || ||| ||| ||| || || Sbjct 32175 TTGACTGGCAATGAAGACATTATTGAAACAAGATGCAATGCCCTTCACTGCCGCTAAAAA 32234 Query 160826 CATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGC 160885 | | | ||| ||| || || | ||| || |||||||| | |||||||| Sbjct 32235 GGATTCAGGAGATTTTTTGTCAACATGAATGCAGTAATAATTCTGAGGTGTGTAGATGGT 32294 Query 160886 CCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGG 160945 || || | ||| || | ||| || || || |||| | ||| || || || || || || Sbjct 32295 TCTTAGGAGCCTATCAAGCATTTCAATTTTGTGATAAACCACTATGGAATATGCAATGGG 32354 Query 160946 AAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAA 161003 ||| || | |||||| || |||| | | | | || || || ||||| || ||| Sbjct 32355 AAATTCTGCCTCCTCTTTGCTAAGGGGCTCCATGATATATTTGCGGGTCTTAATGAAA 32412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575215448484360