Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_020485.1 Length=34302 Score E Sequences producing significant alignments: (Bits) Value seq229759 196 1e-45 >seq229759 Length=864 Score = 196 bits (216), Expect = 1e-45 Identities = 426/631 (68%), Gaps = 10/631 (2%) Strand=Plus/Plus Query 10874 CGCTTATGAGCAGACAGTAAAAGAGGAAATGAACTTTCAGAAAAGCTTTAATCATCACGT 10933 ||| || || || || || || | | || ||||||| || ||||| | ||| | Sbjct 158 CGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCT-CTTTACCAACCACCT 216 Query 10934 GCGAACACTTATTGCGCGTGAAGAGGTAGCAATTGGTCTTATGCATTTGTGGGACTTTGT 10993 | |||| ||| | | || || || | || || | || |||||| ||||||||||||| Sbjct 217 GGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTTGT 276 Query 10994 GGAGGCCTATGTTCAAAATCCCAGCAGCAAGCCGTTAACAGCA-CAACTTTTTCTTATTG 11052 | || || || || | ||||||||| | | || | || || ||||| | Sbjct 277 CTTG-CCGCTGGAATCAACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTTATAG 335 Query 11053 TTCAGCACAGTAGAGATAATGAAACTTTTAGGGAAGCCATGCTAAACATTGCAGAACCGG 11112 | ||||||| | || || || | || ||||| || |||||||||| | ||| || | Sbjct 336 TGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCG 395 Query 11113 AGGGCCGTTGGCTTCTTGACTTAATTAACATTTTGCAAAGCATTGTAGTACAAGAGCGCT 11172 ||||||| ||||| || || || || |||||| |||| ||||| || || || |||||| Sbjct 396 AGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAGCGCA 455 Query 11173 CCCTAAGTTTGTCAGACAAAGTTGCCGCTATTAACTACAGCATGTTGTCTTTGGGCAAAT 11232 || | || || | ||||| | ||||| |||||||| |||| | | ||||||| | Sbjct 456 CCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTGGGCAAGT 515 Query 11233 TTTATGCGCGAAAAATTTACAAGTCGCCATTTGTGCCTATTGACAAGGAGGTAAAAATTG 11292 |||| | || | | ||| | | || | || || | || | |||||||| || | Sbjct 516 TTTACTCCCGCTGA-TATACCATACCCCTTACGTTCCCTTACACCACGAGGTAAAGATCG 574 Query 11293 ATAGTTTTTACATGCGCATGGCCCTAAAGGTGCTGACGCTTAGTGATGACCTTGGCGTGT 11352 | | || ||||||||||||| | |||||||| || | | || ||||| |||| | Sbjct 575 AGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTGAGCGTTT 634 Query 11353 ATCGAAACGATCGTATTCACAAGGCTGTAAGTGCCAGCCGCCGAAGAGAGCTAAGCGATA 11412 |||| ||||| || || ||||| || || || | ||||| || | ||||| ||||| Sbjct 635 ATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCGACC 694 Query 11413 GGGAGTTGCTTCATAGCTTACATCGGGCTTTAACCGGGACTGGAAGCGCAGA---AGCGT 11469 | ||| || | || ||| | || |||| | | || || || |||| || || | Sbjct 695 GCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGACGATAGAGAGG 754 Query 11470 CAGA---CTATTTTGACGCCGGAGCTGACCT 11497 | || ||| |||||||| || |||||||| Sbjct 755 CCGAGTCCTACTTTGACGCGGGCGCTGACCT 785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109283211391248