Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_020487.1 Length=36838 Score E Sequences producing significant alignments: (Bits) Value seq229759 405 1e-108 >seq229759 Length=864 Score = 405 bits (448), Expect = 1e-108 Identities = 436/572 (76%), Gaps = 4/572 (1%) Strand=Plus/Plus Query 11599 CGCGTACGAGGAGACGGTGAAGCAGGAGATGAACTTTCAGAAGAGTTTCAACAACCACGT 11658 ||||||||| | |||||||| || |||| ||||||| || ||| | ||||||| | Sbjct 158 CGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCTCTTT-ACCAACCACCT 216 Query 11659 GCGCACGTTGATCGCGCGCGAGGAGGTGGCCATCGGGCTGATGCATCTGTGGGACTTTGT 11718 | | || | | | |||||||| |||| || | ||||||||||||||||||||||| Sbjct 217 GGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTTGT 276 Query 11719 GGAGGCGTTCGTGAGCAACCCCAACAGCAAGCCTCTGACGGCG-CAGCTGCTGCTGATCG 11777 | || | | | |||||| || |||||||| || | |||| | ||| | || || | Sbjct 277 CTTGCCGCTGGA-ATCAACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTTATAG 335 Query 11778 TGCAACATTCGCGGGACAACGAGGTGTTTAGGGAGGCGCTGCTGAACATCGCCGAGCCCG 11837 |||| || | ||||||||||| || ||||| |||||||| ||||| | ||||||| Sbjct 336 TGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCG 395 Query 11838 AGGGTCGCTGGCTGCTGGACCTGATCAACATCCTGCAGAGTATCGTGGTGCAGGAGCGTT 11897 |||| ||||||||||| || |||| ||||| ||||| || || |||||||||||||| Sbjct 396 AGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAGCGCA 455 Query 11898 CGCTGAGTCTCGGGGAGAAGGTGGCCGCCATCAATTATAGCATGTTGAGTCTGGGCAAAC 11957 | |||| || | || |||| ||||||||| || ||| |||| | | ||||||||| Sbjct 456 CCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTGGGCAAGT 515 Query 11958 ACTACGCCCGCAAGATTTACAAGAGCCCCTTCGTGCCCATCGACAAGGAGGTGAAGATCG 12017 ||| ||||| ||| ||| | | ||| | ||| ||| | || | ||||| ||||||| Sbjct 516 TTTACTCCCGCT-GATATACCATACCCCTTACGTTCCCTTACACCACGAGGTAAAGATCG 574 Query 12018 ATAGCTTTTACATGCGCATGGCCCTGAAGGTGCTGACGCTGAGCGACGACCTGGGCGTCT 12077 | | || ||||||||||||| |||||||||| || ||| |||||||||| |||| | Sbjct 575 AGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTGAGCGTTT 634 Query 12078 ACCGCAACGACCGCATCCACAAGGCCGTGAGCGCCAGTCGCCGGCGCGAGCTCAGCGACC 12137 | |||||||| ||||||||||| |||||||||| || || ||||||||||||||||||| Sbjct 635 ATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCGACC 694 Query 12138 GCGAGCTGATGCACTGCTTGCATCGGGCGCTG 12169 |||||||||||||| || |||| |||| ||| Sbjct 695 GCGAGCTGATGCACAGCCTGCAAAGGGCCCTG 726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117371648937600