Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq101443 120 4e-22 seq66047 105 9e-18 >seq101443 Length=11716 Score = 120 bits (132), Expect = 4e-22 Identities = 159/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 47945 TAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATAC 48004 |||| || | |||||||||| | | || | ||| ||| |||||||||||||||| || Sbjct 5713 TAATTTTTCAAGTTACAAAATTAGCCCCTCTTCTGGGACTCTCATGATTAAAAAGAACAC 5654 Query 48005 CACT-ACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAG 48063 || | |||| || ||| ||| | ||| | ||||| || |||||||| |||| Sbjct 5653 CATTCACAG-CAAACAGGTTGTAGGCCTCATGGAAGTTCACCACAATCCAGTAAGCATAA 5595 Query 48064 AGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTC 48123 ||||||| | ||||| || || || ||||| ||||| || |||| | |||||| | Sbjct 5594 AGTTTTGTGGCTCCATATGGTGACCGAGGATAAAAAGGGGTCTTCTCCTTTTGTGGAATT 5535 Query 48124 TCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTG 48161 ||||| || || |||||||||||||| || || | ||| Sbjct 5534 TCTTGTACTTTCCCATAAAGTTCACTTGTTGAGGTTTG 5497 >seq66047 Length=39292 Score = 105 bits (116), Expect = 9e-18 Identities = 134/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 47986 TCATGATTAAAAAGAATACCACT-ACAGGCATACATTCCGTATGATTCACGATAGTTCTT 48044 ||||||||||||||||||||| | |||| || ||| ||| | |||| ||||| Sbjct 32978 TCATGATTAAAAAGAATACCATTCACAG-CAAACAGGTTGTAGGCGTCACAGAAGTTCAC 32920 Query 48045 TACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGT 48104 || ||| |||| |||| ||||||| | ||||| || || | ||||| ||||| || Sbjct 32919 CACAATCTAGTAAGCATAAAGTTTTGTTGCTCCATATGGTGACCAAGGATAAAAAGGGGT 32860 Query 48105 GGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATA 48164 |||| | ||||| | ||||| || || | |||||||||||| || || |||||||| Sbjct 32859 CATCTCCTTTTGTGGTATTTCTTGTACTTTCCAATAAAGTTCACTTGTTGAGGCTTGATA 32800 Query 48165 GA 48166 || Sbjct 32799 GA 32798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 663184211058520