Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_021168.1 Length=34391 Score E Sequences producing significant alignments: (Bits) Value seq229759 331 2e-86 >seq229759 Length=864 Score = 331 bits (366), Expect = 2e-86 Identities = 428/586 (73%), Gaps = 4/586 (1%) Strand=Plus/Plus Query 10589 ACCGCGTACGAGCAGACGGTGAACGAGGAGCGAAACTTCCAAAAAAGCTTTAACAATCAC 10648 ||||||||||| || ||||||||| | || ||||| | | ||||| ||| ||| Sbjct 156 ACCGCGTACGAACACACGGTGAACCACAAGATTAACTTTCTGACCT-CTTTACCAACCAC 214 Query 10649 GTTAGGACCCTGATTGCGCGAGAGGAGGTGGCCACGGGACTGATGCATCTGTGGGATTTC 10708 | | || || | | || ||||| |||| | ||||||||||||||||||| || Sbjct 215 CTGGGAACTCTTGTGGGACGCGAGGATCTGGCTATACGACTGATGCATCTGTGGGACTTT 274 Query 10709 ATAGAGGCGTACGTACAGAATCCTACTAGCAAGCCGTTGACGGCG-CAGCTGTTCTTGAT 10767 | | || | | || || | |||||||||| | | |||| | |||||| | || Sbjct 275 GTCTTGCCGCTGGAATC-AACCCAAATAGCAAGCCGCTCATGGCGTCCTCTGTTCCTTAT 333 Query 10768 AGTTCAGCACAGTCGCGACAACGAAACGTTTCGCGAGGCCATGTTAAACATCGCGGAGCC 10827 ||| ||||||| |||||||| | || | || || || ||||||| | ||||| Sbjct 334 AGTGCAGCACACCACGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCC 393 Query 10828 CGAGGGTCGGTGGTTGCTGGATCTGGTGAACATCTTGCAAAGCATAGTAGTTCAGGAGAG 10887 |||||| || ||| |||| ||| || | ||||| |||| |||||||| || |||||| | Sbjct 394 CGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCATAGCATAGTGGTGCAGGAGCG 453 Query 10888 GAGCCTGAGCTTGGCCGATAAGGTAGCGGCTATTAACTACTCAATGCAGAGTCTGGGTAA 10947 | | ||||| |||| || |||| || || |||||||| || |||| | |||||| || Sbjct 454 CACCTTGAGCCTGGCTGACAAGGAGGCCGCCATTAACTATTCCATGCTCATTCTGGGCAA 513 Query 10948 ATTTTACGCCCGCAAAATCTACAAGAGTCCATACGTTCCCATCGACAAAGAGGTAAAGAT 11007 |||||| ||||| | | ||| | | || ||||||||| | || | ||||||||||| Sbjct 514 GTTTTACTCCCGCTGA-TATACCATACCCCTTACGTTCCCTTACACCACGAGGTAAAGAT 572 Query 11008 CGACAGCTTTTACATGCGCATGGCTCTAAAGGTGCTGACCCTCAGCGACGACCTCGGGGT 11067 ||| | || ||||||||||||| | |||||||| ||| | | ||||||||| | || Sbjct 573 CGAGGGGTTCTACATGCGCATGGTGTTGAAGGTGCTTACCTTGACCGACGACCTGAGCGT 632 Query 11068 GTACCGCAACGATCGGATACACAAAGCTGTGAGCGCCAGCCGGCGGAGGGAACTGAGCGA 11127 || |||||||| || || ||||| || ||||||| ||||||||| | || || ||||| Sbjct 633 TTATCGCAACGAGCGCATCCACAACGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCGA 692 Query 11128 CAGGGAGCTGATGCACAGCTTGCGAAGGGCTCTGGCGGGCGCGGGC 11173 | | ||||||||||||||| ||| |||||| ||||| ||| ||||| Sbjct 693 CCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGC 738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 109567072172646