Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq65189 102 1e-16 seq53778 93.3 6e-14 seq1300 93.3 6e-14 seq93334 91.5 2e-13 seq5191 91.5 2e-13 seq32393 89.7 8e-13 seq8739 87.8 3e-12 seq100566 84.2 3e-11 >seq65189 Length=19200 Score = 102 bits (112), Expect = 1e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||| || ||||| || || | || ||| || ||| Sbjct 16367 ATGCAGATTTTTGTGAAGACTTTGATGGGGAAAACCATCACCCTTGATGTCAAACCATCT 16308 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||| || || || ||||| ||||| ||||| || ||||| || ||| Sbjct 16307 GATACTATTGAAAATGTCAAGGCCAAGATACATGATAAGGAAGGTATTCCTCCTGACCAA 16248 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||| | || || |||||||| |||||| | ||||| || || || || Sbjct 16247 CAAAGATTGATGTTTGTGGGCAAGCAGCTAGAAGATGGATGTACTTTGTCTGACTACAAC 16188 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || | |||| | || |||||| Sbjct 16187 ATTCAGACAGAGTCTACCCTTCAT 16164 >seq53778 Length=21761 Score = 93.3 bits (102), Expect = 6e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 155844 TTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAA 155903 ||||| ||||| || || || | || | ||| || |||| |||| ||| || ||| Sbjct 17576 TTGACAGGAAAGACCATCACCCTTGAGATTGAACCGTCGGATACTATTGAAAATGTCAAA 17517 Query 155904 AATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGT 155963 || ||||||||||| |||| | || || || |||||||||||||||| ||| || Sbjct 17516 GCCAAGATACAAGATAAGAAAGGTACTCCCCCTGATCAACAAAGATTGATTTTTGCTGGC 17457 Query 155964 AAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATAT 156004 |||||||| |||||| | ||||| ||||| || || || Sbjct 17456 AAGCAGCTGGAAGATGGACGTACTTTGTCAGACTACAACAT 17416 >seq1300 Length=25519 Score = 93.3 bits (102), Expect = 6e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | || || |||| || ||||| || || | || || ||| ||| Sbjct 24971 ATGCAGATATTTGTGAAGACTTTGATGGGGAAAACCATCACCCTTGATGTGGAATTATCT 24912 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| || || || || || |||||||| ||||| || ||||| || || Sbjct 24911 GATACAATTGAAACAGTCAAGGCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGATCAT 24852 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||| | | | | || ||| |||| ||||| | ||||| | ||||||||| Sbjct 24851 CAAAGATTGGTGTTTTCTGGCAAGGAGCTGGAAGAAGGACGTACTTTGGCTGATTATAAT 24792 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || |||||| | || |||||| Sbjct 24791 ATTCAGAAAGAGTCTACCCTTCAT 24768 >seq93334 Length=53926 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/158 (75%), Gaps = 4/158 (3%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAA-ACTATTA-CATTAGAAGTCGAAGATT 155880 ||||| || ||| | || || |||| |||| || ||||| | | ||| | ||| || | Sbjct 25442 ATGCAGATTTTTGTGAAGACTTTGA-TGGAGAAGACTATCATCCTTA-AGGTCAAACCAT 25499 Query 155881 CTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAAC 155940 | |||| |||| ||| || ||| || ||||||||||| ||| || ||||| || | Sbjct 25500 CAGATACTATTGAAAATGTCAAAGCCAAGATACAAGATAAGGAAAATATTCCTCCTGATC 25559 Query 155941 AACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 ||||||||||||||| ||| || ||||| || |||||| Sbjct 25560 AACAAAGATTGATTTTTGCTGGCAAGCAACTAGAAGAT 25597 >seq5191 Length=73165 Score = 91.5 bits (100), Expect = 2e-13 Identities = 147/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| |||||| | || || ||| || ||||| || || | || || ||| ||| Sbjct 37575 ATGCAGATATTTGTGAAGACTCTGATAGGGAAAACCATCACCCTTGATGTGGAATTGTCT 37634 Query 155883 GATAATATTTTAAACG-TGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| || || | || || || || ||||||||||| || ||||| || || Sbjct 37635 GATACAATTG-AATCGATCAAGGCCAAGATTCAGGATAAAGAAGGTATTCCTCCTGATCA 37693 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001 |||||||||||| | ||| || || ||||| ||||| | ||||| | |||||||| Sbjct 37694 ACAAAGATTGATGTTTGCAGGCAAACAGCTAGAAGAAGGATGTACTTTGGCTGATTATAA 37753 Query 156002 TATATCCAAA-GAGGCGACGCTTCAT 156026 || || ||| ||| | || |||||| Sbjct 37754 CAT-TCAAAAGGAGACCACCCTTCAT 37778 >seq32393 Length=14028 Score = 89.7 bits (98), Expect = 8e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || || || || |||| || || || || || || ||| || || Sbjct 8138 ATGCAGATTTTCATAAAGACTTTGAGGGGGAAGACCATCACCCCTGAGGTCAAACCATCA 8197 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||| || |||| || |||| |||||| ||||| || || || || ||| Sbjct 8198 GATACTATTGAAAATGTCAAAACCAAGATACCAGATAAGGAAGGTATTCCCCCTGATCAA 8257 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||| || ||||| || |||| | | ||||| || || || || Sbjct 8258 CAAAGATTGATTTTTGCTGGGAAGCAACTGGAAGGTGGATGTACTTTTTCTGACTACAAC 8317 Query 156003 AT 156004 || Sbjct 8318 AT 8319 >seq8739 Length=53120 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||||||| || || || || | ||||| || | Sbjct 411 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 470 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||||| || || ||||| ||||||||||| || ||||| || Sbjct 471 GACACCATTGAGAACGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 530 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || ||| |||| | |||||| |||||||| |||||| Sbjct 531 CAGAGACTGATCTTTGCCGGGAAGCAGCTGGAAGAT 566 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||||||| || || || || | ||||| || | Sbjct 183 ATGCAGATTTTCGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTGGAGCCCAGT 242 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||||| || || ||||| ||||||||||| || ||||| || Sbjct 243 GACACCATTGAGAACGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 302 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || |||||||| | ||| || |||||||| |||||| Sbjct 303 CAGAGATTGATCTTTGCTGGAAAGCAGCTGGAAGAT 338 >seq100566 Length=62511 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||||||| || || || || | ||||| || | Sbjct 20730 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 20671 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || ||||| || || ||||| ||||||||||| || ||||| || Sbjct 20670 GACACCATTGAGAATGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 20611 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || |||||||| | ||| || |||||||| |||||| Sbjct 20610 CAGAGATTGATCTTTGCTGGAAAGCAGCTAGAAGAT 20575 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||||||| || || || || | ||||| || | Sbjct 20958 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 20899 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || |||||| || || ||||| ||||||||||| || ||||| || Sbjct 20898 GACACCATTGAGAATGTGAAAGCAAAGATTCAAGACAAAGAAGGCATCCCCCCAGATCAG 20839 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || ||||| | ||| || |||||||| |||||| Sbjct 20838 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGAT 20803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729331388687600