Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq92824 122 3e-22 seq23534 95.1 4e-14 >seq92824 Length=186084 Score = 122 bits (134), Expect = 3e-22 Identities = 396/599 (66%), Gaps = 22/599 (4%) Strand=Plus/Minus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAA-CAGCAAGA 133134 || || || ||||| ||| || || | || |||||||| |||||||| ||| ||| | | Sbjct 146639 TTCGTCATCTTCCCCATTCAGTACCATGACATTTGGCACATGTATAAGAAAGCAG-AGGC 146581 Query 133135 TTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACC--CAGCCCACTGGGAAGCC 133192 | || ||||| | || || ||| | || || || |||| |||||||| | Sbjct 146580 CTCCTTCTGGACGGCTGAGGAGGTGGATCTCTCTAAGGATATTCAGC--ACTGGGAAACA 146523 Query 133193 CTTA---CTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGT 133249 || | ||| ||| |||| || | ||| || | || || ||| || ||||| || ||| Sbjct 146522 CTGAAGCCTGAGGA-GAAATACTTCATATCTC-ACGAGTT-AGCTTTCTTTGCAGCAAGT 146466 Query 133250 GATGGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAA 133309 ||||| || || ||||||||| | ||||| | |||||| || || | ||| Sbjct 146465 GATGGCATAGTAAATGAAAATTTGGTGGAGCGGTTCAGCCAAGAAGTACAGGTGACTGAA 146406 Query 133310 GCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCT 133369 || || || ||||| | || ||||| |||||||| || |||||| | ||| | Sbjct 146405 GCTCGCTGTTTCTATGGCTTCCAAATTGCTATGGAAAACATACATTCTGAAATGTATAGT 146346 Query 133370 ACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAA--CTATTCAACGCCA 133427 || ||||| ||||| || || || || |||| | || || ||||| |||| Sbjct 146345 CTCCTTATTGACACTTATATTAAGGACCCCAA--AGAAAGAGAATTTCTCTTCAATGCCA 146288 Query 133428 TT--AGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA 133485 || | || | |||||| ||||||||||| |||||||||| | ||||| ||| Sbjct 146287 TTGAAACGC--TGCCTTGTGTTAAAAAGAAAGCTGACTGGGCCTTGCGGTGGATTGGGGA 146230 Query 133486 CAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAttttttt 133545 || || | | || | ||| | || |||||||| | || || || || || || Sbjct 146229 CAGAGAAGCAACATATGGTGAACGTGTTGTAGCTTTTGCGGCTGTTGAAGGAATCTTCTT 146170 Query 133546 CAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGT 133604 |||| | || ||| || || || ||||| || || || ||| | | ||||| | Sbjct 146169 TTCTGGTTC-TTTTGCATCCATATTCTGGCTCAAGAAACGAGGTTTAATGCCTGGGTTAA 146111 Query 133605 GTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTA 133663 |||||| || ||||||||| || || |||| | ||| || |||||| |||| Sbjct 146110 CTTTTTCCAATGAACTTATTAGTAGAGATGAGGGTTTGCACTGTGATTTTGCCTGTTTA 146052 >seq23534 Length=47456 Score = 95.1 bits (104), Expect = 4e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 ||||||| || ||| || ||||| || ||||| || || |||| |||||||| ||||| Sbjct 33472 ACCAGTTTCAGCTGTCTTGACAGCAGTGTCAATAAGCCCTTCACGCCCACCCATGGCATG 33413 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 |||||| | ||| ||| || || | | ||||| |||| || || || || Sbjct 33412 GAAGAAGAACTCGGTGGGTGTGAGACCAGCCAAGTAGGAGTTCTCCACAAAGCCTCGGCT 33353 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||| || || || ||| | ||||| || |||||||||| | |||| | || Sbjct 33352 CTCAGGACCATAATCATCTTTGATGAAGTGGGGAAGGGTCCTGTGTTTGAAGCCAAAGGG 33293 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCCCA 302818 || ||||| || ||||| ||||||||||||| Sbjct 33292 AATCCGCTTGCCTTCAACATTCTGCTGTCCCA 33261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1466580619550607