Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq32393 91.5 2e-13 seq55504 87.8 3e-12 seq53778 86.0 1e-11 >seq32393 Length=14028 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090 |||| || |||||||| || || | || || || || || ||| || ||| || | Sbjct 8139 TGCAGATTTTCATAAAGACTTTGAGGGGGAAGACCATCACCCCTGAGGTCAAACCATCA- 8197 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||||||| ||||||| |||| || |||| | ||| ||||| ||||| || |||||| Sbjct 8198 GATACTATTGAAAATGTCAAAACCAAGATACCAGATAAGGAAGGTATTCCCCCTGATCAA 8257 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAA 146177 |||||| | |||||||| || || ||| Sbjct 8258 CAAAGATTGATTTTTGCTGGGAAGCAA 8284 >seq55504 Length=131191 Score = 87.8 bits (96), Expect = 3e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||||||||||| || || | || | || || |||| || ||| | Sbjct 32597 TGCAGATTTTCATAAAAACTTTGACGGAGAAGATCATCACCCTTGAGGTCAAACCACTGG 32656 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| ||||||| ||| || ||||| ||| ||||| ||||| || ||||||| Sbjct 32657 ATACTATTGAAAATGTCAAACCCAATGTACAAGATAATGAAGGTATTCCCCCTGATCAAC 32716 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTT 146197 ||||| | |||||||| || || || | || ||| | || || || Sbjct 32717 AAAGATTTATTTTTGCTGGCAAGTAACTGGAAGATGAAAGTACTTT 32762 >seq53778 Length=21761 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 146033 GCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGA 146092 ||| || ||| | || | || |||||||| || || || |||| | |||| || Sbjct 17595 GCAGATTTTCGTGAAGATTTTGACAGGAAAGACCATCACCCTTGAGATTGAACCGTCGGA 17536 Query 146093 TACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACA 146152 ||||||| ||||||| ||| || |||||| ||| |||| | ||| || |||||||| Sbjct 17535 TACTATTGAAAATGTCAAAGCCAAGATACAAGATAAGAAAGGTACTCCCCCTGATCAACA 17476 Query 146153 AAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATAT 146212 |||| | |||||||| || || || | || ||| | || || |||| || || || Sbjct 17475 AAGATTGATTTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCAGACTACAACAT 17416 Query 146213 ACAAAAAGAATCGAC 146227 || || ||||| || Sbjct 17415 TCAGAAGGAATCTAC 17401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783437311786120