Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06]
277,711 sequences; 3,075,184,024 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq32393 91.5 2e-13
seq55504 87.8 3e-12
seq53778 86.0 1e-11
>seq32393
Length=14028
Score = 91.5 bits (100), Expect = 2e-13
Identities = 110/147 (75%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAAC-ATAAC 146090
|||| || |||||||| || || | || || || || || ||| || ||| || |
Sbjct 8139 TGCAGATTTTCATAAAGACTTTGAGGGGGAAGACCATCACCCCTGAGGTCAAACCATCA- 8197
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
||||||||| ||||||| |||| || |||| | ||| ||||| ||||| || ||||||
Sbjct 8198 GATACTATTGAAAATGTCAAAACCAAGATACCAGATAAGGAAGGTATTCCCCCTGATCAA 8257
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAA 146177
|||||| | |||||||| || || |||
Sbjct 8258 CAAAGATTGATTTTTGCTGGGAAGCAA 8284
>seq55504
Length=131191
Score = 87.8 bits (96), Expect = 3e-12
Identities = 119/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||||||||||| || || | || | || || |||| || ||| |
Sbjct 32597 TGCAGATTTTCATAAAAACTTTGACGGAGAAGATCATCACCCTTGAGGTCAAACCACTGG 32656
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| ||||||| ||| || ||||| ||| ||||| ||||| || |||||||
Sbjct 32657 ATACTATTGAAAATGTCAAACCCAATGTACAAGATAATGAAGGTATTCCCCCTGATCAAC 32716
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTT 146197
||||| | |||||||| || || || | || ||| | || || ||
Sbjct 32717 AAAGATTTATTTTTGCTGGCAAGTAACTGGAAGATGAAAGTACTTT 32762
>seq53778
Length=21761
Score = 86.0 bits (94), Expect = 1e-11
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 146033 GCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGA 146092
||| || ||| | || | || |||||||| || || || |||| | |||| ||
Sbjct 17595 GCAGATTTTCGTGAAGATTTTGACAGGAAAGACCATCACCCTTGAGATTGAACCGTCGGA 17536
Query 146093 TACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACA 146152
||||||| ||||||| ||| || |||||| ||| |||| | ||| || ||||||||
Sbjct 17535 TACTATTGAAAATGTCAAAGCCAAGATACAAGATAAGAAAGGTACTCCCCCTGATCAACA 17476
Query 146153 AAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATAT 146212
|||| | |||||||| || || || | || ||| | || || |||| || || ||
Sbjct 17475 AAGATTGATTTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCAGACTACAACAT 17416
Query 146213 ACAAAAAGAATCGAC 146227
|| || ||||| ||
Sbjct 17415 TCAGAAGGAATCTAC 17401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 783437311786120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |