Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq25410 93.3 4e-14 seq112454 89.7 5e-13 >seq25410 Length=13808 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 20348 GGCTTTGACTGTGCCAGTAAGCAGGAGATTCAGTTACTGCAAAATCTGGGAGTTCACGCA 20407 || ||||| ||||| || ||| || || || ||||| |||| ||| || || | | || Sbjct 4209 GGATTTGATTGTGCTAGCAAGACTGAAATACAATTACTACAAAGTCTTGGGGTGCCCCCA 4268 Query 20408 GACAGGATACTTTTTGCGAATCCTTGTAAGCAGCCTTCGCATATAACGTATGCCGCTCAA 20467 || |||||| | | ||| ||||| || || || || || || | |||||| || | Sbjct 4269 GAGAGGATAATCTATGCAAATCCATGCAAACAAGTGTCACAGATTAAGTATGCTGCCAAC 4328 Query 20468 ACTGGAGTAAGGCTGATGACTTTTGATAGTGAAGAAGAGCT 20508 | ||||||| |||||||||||||||| |||| |||||| Sbjct 4329 AATGGAGTACAAATGATGACTTTTGATAGAGAAGTAGAGCT 4369 >seq112454 Length=40038 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 21005 TTTATGTATTATGTTAATGATGGCGTCTATGGCAGTTTTAACTGCATATTATTTAACCAT 21064 ||| | || ||||| |||||||| || ||||| ||||| || || | ||| | ||| Sbjct 37333 TTTTTATACTATGTAAATGATGGAGTATATGGATCATTTAATTGTATCCTGTTTGATCAT 37392 Query 21065 GCTCGTCCTATGCCTATGCTGCTTAA-AGAAAAACGCCTTGAAGACAAAGACTATGTTTC 21123 ||| || || ||||| || | || ||| | || || || || | || || Sbjct 37393 GCTTGTGTTAAACCTATTCTACAAAAGAGACCCAAACCA-GATGAGAAGTATTACTCTTG 37451 Query 21124 TAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCC 21183 |||||| ||| | || | || |||||| | ||||| |||||| | || ||||| | || Sbjct 37452 TAGCATATGGAGACCAACATGTGATGGCCTTGATTGAATTGTTGAACGCTGTGATTTACC 37511 Query 21184 AGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTA 21231 ||| | || ||||| |||||| | | || ||||||||||| ||||| Sbjct 37512 AGAAATGCATGTGGGAGACTGGATGCTCTTAGAAAACATGGGTGCTTA 37559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461936453598480