Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1300 123 6e-23 seq53778 91.5 3e-13 seq8739 89.7 1e-12 seq4507 89.7 1e-12 >seq1300 Length=25519 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| || || | | || ||||| ||||| | || |||||| ||||| Sbjct 24968 CAGATATTTGTGAAGACTTTGATGGGGAAAACCATCACCCTTGATGTGGAATTATCTGAT 24909 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| |||| ||| ||||||||||| || ||||| ||| || || |||| Sbjct 24908 ACAATTGAAACAGTCAAGGCCAAGATTCAAGATAAGGAAGGTATTCCTCCTGATCATCAA 24849 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | | || | || ||| || ||||||| ||| | |||||||| ||||| || | Sbjct 24848 AGATTGGTGTTTTCTGGCAAGGAGCTGGAAGAAGGACGTACTTTGGCTGATTATAATATT 24789 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||||||||| ||||| || | | |||| ||||| Sbjct 24788 CAGAAAGAGTCTACCCTTCATCTGGCTCTGAGGCTTCG 24751 Score = 87.8 bits (96), Expect = 4e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| |||| | | || ||||| |||||||||||||| | |||||| ||||||||||| Sbjct 24751 CGAAGCCTCAGAGCCAGATGAAGGGTAGACTCTTTCTGAATATTATAATCAGCCAAAGTA 24810 Query 204812 CTTCCATCTTCCAGCTGCTTTCC 204834 | ||| |||||||||| ||| || Sbjct 24811 CGTCCTTCTTCCAGCTCCTTGCC 24833 >seq53778 Length=21761 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 |||||||| || ||||| | || | ||| || || || | ||| || ||||| Sbjct 17573 ACAGGAAAGACCATCACCCTTGAGATTGAACCGTCGGATACTATTGAAAATGTCAAAGCC 17514 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 || ||| ||||| || |||| | | || || |||||| | || || || || || Sbjct 17513 AA-GATACAAGATAAGAAAGGTACTCCCCCTGATCAACAAAGATTGATTTTTGCTGGCAA 17455 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 |||| ||||||||||| | |||||| | || |||||| | ||||| || ||||| ||||| Sbjct 17454 GCAGCTGGAAGATGGACGTACTTTGTCAGACTACAACATTCAGAAGGAATCTACCCTTCA 17395 Query 206373 CCTTGTTTTGAG 206384 |||||| |||| Sbjct 17394 TCTTGTTCTGAG 17383 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 204758 CTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCA 204817 |||| |||||| ||||| ||||| || ||||| | || ||||| | |||||| | |||| Sbjct 17383 CTCAGAACAAGATGAAGGGTAGATTCCTTCTGAATGTTGTAGTCTGACAAAGTACGTCCA 17442 Query 204818 TCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 |||||||||||||| || || || || | | ||||||| Sbjct 17443 TCTTCCAGCTGCTTGCCAGCAAAAATCAATCTTTGTTGA 17481 >seq8739 Length=53120 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||||||| |||||||| || ||||| || || || ||||| Sbjct 714 GTCAAGGCAAAGATTCAAGACAAAGAAGGCATCCCCCCGGATCAGCAGAGGCTGATCTTT 773 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||||||| |||||||||| | || || | || |||||| |||||||||| || Sbjct 774 GCTGGAAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAACATCCAGAAAGAATCC 833 Query 206365 ACTCTTCAC 206373 || || ||| Sbjct 834 ACCCTGCAC 842 >seq4507 Length=158405 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||| || || ||||| |||| ||||| |||| Sbjct 141773 CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGAC 141714 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || || || ||||| || || || ||| || Sbjct 141713 ACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAGCAG 141654 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || |||||| |||||||||| | || || | || |||||| || Sbjct 141653 AGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAACATC 141594 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| |||||||| || || || | ||| || Sbjct 141593 CAGAAAGAGTCCACTCTTCATCTGGTCCTGCGTCTTAGA 141555 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||| || || ||||| |||| ||||| |||| Sbjct 142457 CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGAC 142398 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || || || ||||| || || || ||| || Sbjct 142397 ACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAGCAG 142338 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || |||||| |||||||||| | || ||| | || |||||| || Sbjct 142337 AGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCTTGTCTGACTACAACATC 142278 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| || ||||| || || || | ||| || Sbjct 142277 CAGAAAGAGTCCACCCTTCATCTGGTCCTGCGTCTTAGA 142239 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||| || || ||||| |||| ||||| |||| Sbjct 141317 CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGAC 141258 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || || || ||||| || || || ||| || Sbjct 141257 ACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAGCAG 141198 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || |||||| |||||||||| | || || | || |||||| || Sbjct 141197 AGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAACATC 141138 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||||||| |||||||| || || Sbjct 141137 CAGAAAGAGTCCACTCTTCATCTGGT 141112 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||| || || ||||| |||| ||||| |||| Sbjct 141545 CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGAC 141486 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || || || ||||| || || || ||| || Sbjct 141485 ACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAGCAG 141426 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || |||||| |||||||||| | || || | || |||||| || Sbjct 141425 AGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAACATC 141366 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| || ||||| || || || | ||| || Sbjct 141365 CAGAAAGAGTCCACCCTTCATCTGGTCCTGCGTCTTAGA 141327 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||| || || ||||| |||| ||||| |||| Sbjct 142001 CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGAC 141942 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || || || ||||| || || || ||| || Sbjct 141941 ACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAGCAG 141882 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || |||||| |||||||||| | || || | || |||||| || Sbjct 141881 AGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAACATC 141822 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| || ||||| || || || | ||| || Sbjct 141821 CAGAAAGAGTCCACCCTTCATCTGGTCCTGCGTCTTAGA 141783 Score = 84.2 bits (92), Expect = 5e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || ||||| || || ||||| |||| ||||| |||| Sbjct 142229 CAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGAC 142170 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || || || ||||| || || || ||| || Sbjct 142169 ACCATTGAGAATGTGAAGGCCAAAATCCAGGATAAAGAGGGCATCCCCCCTGACCAGCAG 142110 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || || ||||| || || |||||| |||||||||| | || || | || |||||| || Sbjct 142109 AGGCTGATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACCCTGTCTGACTACAACATC 142050 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| || ||||| || || || | ||| || Sbjct 142049 CAGAAAGAGTCCACCCTTCATCTGGTCCTGCGTCTTAGA 142011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177615678098831