Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2532 136 5e-27 seq20275 125 8e-24 seq1233 122 1e-22 seq15296 109 6e-19 seq86693 95.1 1e-14 seq3044 93.3 5e-14 >seq2532 Length=66247 Score = 136 bits (150), Expect = 5e-27 Identities = 409/630 (65%), Gaps = 26/630 (4%) Strand=Plus/Plus Query 146871 AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAG-CTGAATTTTCAGGGGCTCCA 146929 ||| |||||||| ||||| |||| || ||| || | |||||||||||| ||| | | Sbjct 36512 AATTTTGAGCTTTGGGAAAGGTCTTGG-TTCTTGCTGAATCTGAATTTTCAGTGGCCCAA 36570 Query 146930 CGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGC 146989 || || | ||| | ||| || || ||||| |||| ||||| || || | ||| |||| Sbjct 36571 TATGATTCAAGTATATGTGAGCATCTCCCAGAATGTGTACAAAATCACCTGACTTTAGGC 36630 Query 146990 CGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCC 147049 | | | ||| || | ||||||||||||||| || || ||||| |||||||| | ||| Sbjct 36631 CTGGGATGTGAGCAATCATGTAGGTGAGCAGGGAATAACTGGCAATGTTGAATGACACCT 36690 Query 147050 CCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGT 147109 ||||||||||| || | | |||||| || || || | ||||| || | || | Sbjct 36691 GGAGGCCCATGTCTCCACATCACTGGTATAGTTGACAAAAAAGCTCACCATTCAATACAT 36750 Query 147110 AAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCC 147169 | |||||| | || ||| | || ||||| ||||| || || || || |||| Sbjct 36751 AGAACTGGTAGAGAGCATGGTATGGAGGCAGTGCCATCAGAGGAAGATCTTTAGGATTCC 36810 Query 147170 AGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACC 147229 | | | | | | || ||| || ||||| | || | | || || || Sbjct 36811 AAGTACACATAATGATCCTTCTGTCATCAGGGTTGGTTTTGGTTGCCTCAATGAC----- 36865 Query 147230 TCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAA 147289 ||| |||| | || | ||| || ||| |||||| Sbjct 36866 --------TCCTTGCCCAG-----AATAATCTGTGTTCATCTCTTTGTATTCTGCCCCAC 36912 Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349 | || ||||||||||| || |||||||| |||| || || || ||| | ||| Sbjct 36913 AATGTCTCCACTGGAAACCATACACTGGTCCCAAATCTCCTTCCTCCCTGGTAGTGAA-- 36970 Query 147350 CCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGG 147406 | || ||||| | ||| || | || || | ||| |||||||| |||| | |||| Sbjct 36971 -CCCCTGCTTGTCCAAAAAGTCTCGAGATCCATTGGCATCCCAGATTTTCACTTCTTTGG 37029 Query 147407 CGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCC 147466 | |||||||| |||| | ||||| ||| || ||||| ||||| | ||||| | | Sbjct 37030 CAGAGAGCTCTTTAGCATTTGTGGAACCCTTAATAAACCACAGCAGTTTCTCCAGCTCAC 37089 Query 147467 CCCTCCAAAAGACCCTCTTGGTGGTCAGCA 147496 || |||| || || |||||| ||||||| Sbjct 37090 CCTTCCAGAACACAGGCTTGGTTGTCAGCA 37119 >seq20275 Length=61036 Score = 125 bits (138), Expect = 8e-24 Identities = 126/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 146983 TTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAG 147042 || ||||| || || || || | ||||||||||||||| | || ||||| |||||||| Sbjct 38066 TTCAGGCCTGTGACATGAGCAATCATGTAGGTGAGCAGGGCATAACTGGCGATGTTGAAC 38125 Query 147043 GGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCG 147102 || ||||| ||||||||||| || || | |||||||||||| || || ||||| || | Sbjct 38126 GGCACCCCGAGGCCCATGTCTCCAGAGCGCTGGTACAGCTGACAAGAAAGCTCACCATTC 38185 Query 147103 GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||| |||||||| || ||||| || ||||| ||||| Sbjct 38186 AGTACGTAGAACTGGCAGAGAGCATGGCATGGAGGCAGTGCCAT 38229 >seq1233 Length=18904 Score = 122 bits (134), Expect = 1e-22 Identities = 226/324 (70%), Gaps = 7/324 (2%) Strand=Plus/Minus Query 146827 AAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAA-AATCTTGAGCTTGGG 146885 || ||||||| | ||||||| || ||| || | | | || ||| |||||||| || Sbjct 13913 AAGTCTTCTGTCTTGAAATCATCAATGATTTC-AGCTTTTTAAAGAATTTTGAGCTTAGG 13855 Query 146886 GAAGGGTCGGGGGT-TC-CTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAG 146943 ||| |||| || | || ||| | |||||||||||| || || | || || | || Sbjct 13854 GAAAGGTCTTGGTTCTCACTGA--ATCTGAATTTTCAGTGGATCAATATGATTCAAATAT 13797 Query 146944 ACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCC 147003 | || || || ||||| ||||| ||||| || || ||||| ||| | || | ||| | Sbjct 13796 AGATGAGCATCTCCCAGTGTGTGAACAAAATCACCTGGCTTCAGGACTGTAATGTGAGTG 13737 Query 147004 ACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGG-CCCATGTC 147062 | ||||||||||||||| || || ||||| |||||||| || | ||| | ||| || Sbjct 13736 ATCATGTAGGTGAGCAGGGAATAACTGGCAATGTTGAACATCACTCTGAGGTCACATATC 13677 Query 147063 CCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAG 147122 || || |||||| | ||| || || ||||| || | || || || ||||| || Sbjct 13676 TCCAGATTGCTGGTATAACTGACAAGAAAGCTCACCATTCCATACATAGAATTGGCAGAG 13617 Query 147123 GATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| || || || ||||| Sbjct 13616 AGTGTGGCATGGAGGTAGAGCCAT 13593 >seq15296 Length=69570 Score = 109 bits (120), Expect = 6e-19 Identities = 190/277 (69%), Gaps = 16/277 (6%) Strand=Plus/Plus Query 146871 AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAG-CTGAATTTTCAGGGGCTCCA 146929 ||| |||||||| ||||| |||| | ||| || | ||||||||||| | | | | Sbjct 63930 AATTTTGAGCTTAGGGAAAGGTCTTGA-TTCTTGCTGAATCTGAATTTTCAATGACACAA 63988 Query 146930 CGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGC 146989 || |||| || | ||| || || ||||| ||||| ||||| || || ||||| |||| Sbjct 63989 TATGATTGAAGTGCATGTGAGCATCTCCCAGAGTGTGTACAAAATCACCTGGCTTCAGGC 64048 Query 146990 CGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCC 147049 | || ||||| || | |||||||||||| || || | ||||| |||||||| | || | Sbjct 64049 CTGTGACGTGAGCAATCATGTAGGTGAGTAGGGAAGAACTGGCAATGTTGAATGACACAC 64108 Query 147050 CCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGT 147109 | ||||| | ||| ||||| || || ||||| || | |||| Sbjct 64109 TGAAGCCCA--------------TAGTATAGCTGACAAGAAAGCTCACCATTCAATACGT 64154 Query 147110 AAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 | |||||||| || ||||| || ||||| ||||| Sbjct 64155 AGAACTGGCAGAGAGCATGGCATGGAGGCAGTGCCAT 64191 >seq86693 Length=25353 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 8641 GGCAATGCCCTGGTGATCCTAGTCCTCATAAAGTACAAGAGGCTCAGGATCATGACCAAC 8700 ||||||||| ||||| | | |||||| |||||||||||| |||| || ||||||||| Sbjct 21239 GGCAATGCCATGGTGGTGTTGATCCTCACAAAGTACAAGAGACTCAAGACCATGACCAAT 21298 Query 8701 ATCTTCCTGTTCAACCTGGCCCTTGGTGACCTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760 |||| ||| ||||| ||||||| |||||||| | | | || || || || ||| Sbjct 21299 ATCTACCTTCTCAACTTGGCCCTCTCCGACCTGCTTTTCCTCATTACGCTTCCATTCTGG 21358 Query 8761 ATTCACT 8767 ||||||| Sbjct 21359 ATTCACT 21365 >seq3044 Length=71009 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 || ||||| | || ||||||||||||||||| ||||||||||||||| ||||||| |||| Sbjct 9374 AGAGTTACCTTGGCTGCCAGGCCTTGTCAGAAATGATTCAGTTTTACCTGGAGGAAGTGA 9433 Query 178291 TGCCTCAGGCCGAGAA 178306 ||||| ||| ||||| Sbjct 9434 TGCCTTGGGCGGAGAA 9449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581462487050400