Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq100566 96.9 3e-15 seq8739 89.7 4e-13 seq62487 86.0 5e-12 seq63886 82.4 6e-11 >seq100566 Length=62511 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| || || ||||||||||||||||| ||| | ||| ||| ||| | Sbjct 20958 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 20899 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | |||||| ||| ||| |||||||||||| | ||| ||||| Sbjct 20898 GACACCATTGAGAATGTGAAAGCAAAGATTCAAGACAAAGAAGGCATCCCCCCAGATCAG 20839 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 || ||| | || | ||| || || || | |||||| || | |||| || |||| Sbjct 20838 CAGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTAT--CTGACTACA 20781 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGTATT 106471 |||| || |||||||| || || || || || || Sbjct 20780 ACATCCAGAAAGAATCCACCCTGCACTTGGTCTT 20747 >seq8739 Length=53120 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| || || ||||||||||||||||| ||| | ||| ||| ||| | Sbjct 639 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 698 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || ||| ||| |||||||||||| | ||| ||||| Sbjct 699 GACACCATTGAGAATGTCAAGGCAAAGATTCAAGACAAAGAAGGCATCCCCCCGGATCAG 758 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| || | ||| || || || | |||||| || || || |||||| Sbjct 759 CAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGTACCCTGTCTGACTACAAC 818 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || |||||||| || || || || || || | || | ||||| Sbjct 819 ATCCAGAAAGAATCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 865 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/211 (69%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || ||||| || || ||||||||||||||||| ||| | ||| ||| ||| | Sbjct 411 ATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAGT 470 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | ||||| ||| || |||||||||||| | ||| || || Sbjct 471 GACACCATTGAGAACGTGAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCAG 530 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT--TCTAAAACTATGGGCGATTACA 106437 || || || || | ||| || || || | |||||| || | |||| || |||| Sbjct 531 CAGAGACTGATCTTTGCCGGGAAGCAGCTGGAAGATGGTCGCACCCTAT--CTGACTACA 588 Query 106438 ACATACAAAAAGAATCTACACTACATTTAGT 106468 |||| || |||||||| || || || || || Sbjct 589 ACATCCAGAAAGAATCCACCCTGCACTTGGT 619 >seq62487 Length=10509 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| || ||||| || || ||||||||||||||||| ||| | ||| ||| ||| | Sbjct 5626 AATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAAGTAGAGCCCAG 5685 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | ||| | || || ||| || |||||||||||| | ||| || || Sbjct 5686 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCAGACCA 5745 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 || ||||| || | ||| || || || | |||||| | || || || || || Sbjct 5746 GCAGAGGCTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCATACCCTGTCTGACTAGAA 5805 Query 106439 CATACAAAAAGAATCTACACTACATTTAGT 106468 ||| ||||||||||| || || || || || Sbjct 5806 CATCCAAAAAGAATCCACCCTGCACTTGGT 5835 >seq63886 Length=20840 Score = 82.4 bits (90), Expect = 6e-11 Identities = 141/204 (69%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 106259 AATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGG 106318 |||||| |||||||| || || ||||||||||| ||||| ||| | ||| ||| ||| | Sbjct 19797 AATGCAGATTTTTGTGAAGACCTTGACTGGCAAAACCATCACCCTTGAAGTAGAGCCCAG 19856 Query 106319 CGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCA 106378 || | ||| | || || | |||||| |||| |||||| | ||| ||| | Sbjct 19857 TGACACCATTGAGAATGTCAACC--AAAATTCAGTACAATGAAGGCATCCCCCGAGATGA 19914 Query 106379 ACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAA 106438 || || || || | ||| || || ||||||| | | || || || ||||| Sbjct 19915 GCAGAGCCTAATCTTTGCCGGGAAGTGGACAGAAGATGGTCACACCCTGTCTGACTACAA 19974 Query 106439 CATACAAAAAGAATCTACACTACA 106462 |||||| ||||||||||| || || Sbjct 19975 CATACAGAAAGAATCTACGCTGCA 19998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 400967874104288